RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 SPAG6O75602 509 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 RFPL3O75679 317 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 AHSGP02765 367 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 FTH1P19P0C7X4 201 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 GABRB3P28472 473 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 CCR7P32248 378 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 RPA4Q13156 261 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 ILKQ13418 452 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 BOP1Q14137 746 aaKnown RBP14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 BRD3Q15059 726 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 SYTL3Q4VX76 610 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 CCDC157Q569K6 752 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 PERM1Q5SV97 790 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 NAPRTQ6XQN6 538 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 GALNT7Q86SF2 657 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 CCDC74AQ96AQ1 378 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 WWP1Q9H0M0 922 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 CCDC68Q9H2F9 335 aa14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 ZNF624Q9P2J8 865 aaPredicted RBP14.16□□□□□ -0.14
DNMT3A-208ENST00000466601 PIKFYVEQ9Y2I7 2098 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 TCRBV9S1A1TA0A576 114 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 SLC5A10A0PJK1 596 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 OR52A4PA6NMU1 304 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 KPNA5O15131 536 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 PPM1DO15297 605 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 NIPSNAP2O75323 286 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 APOA4P06727 396 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 GP1BAP07359 652 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 SLC35G4P0C7Q5 338 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 PNLIPP16233 465 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 XRCC1P18887 633 aaPredicted RBP14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 CHRM3P20309 590 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 AOAHP28039 575 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 PDHA2P29803 388 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 SLC19A1P41440 591 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 FASLGP48023 281 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 PREPP48147 710 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 UBE2IP63279 158 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 PLOD1Q02809 727 aaPredicted RBP14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 HHEXQ03014 270 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 RPE65Q16518 533 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 KYNUQ16719 465 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 CAPRIN2Q6IMN6 1127 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 ZNF549Q6P9A3 640 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 DGLUCYQ7Z3D6 616 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 SLC26A11Q86WA9 606 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 TRIM48Q8IWZ4 208 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 EIF1ADQ8N9N8 165 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 AVL9Q8NBF6 648 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 CDKL2Q92772 493 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 TMEM159Q96B96 161 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 CXorf40BQ96DE9 158 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 INSM2Q96T92 566 aaPredicted RBP14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 CDC42EP4Q9H3Q1 356 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 STN1Q9H668 368 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 ANKZF1Q9H8Y5 726 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 SARS2Q9NP81 518 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 SMYD2Q9NRG4 433 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 NSMCE4AQ9NXX6 385 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 NINJ2Q9NZG7 142 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 CPNE7Q9UBL6 633 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 COMMD10Q9Y6G5 202 aa14.15□□□□□ -0.14
DNMT3A-208ENST00000466601 FAM159BA6NKW6 160 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 CXorf49A8MYA2 514 aaPredicted RBP14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 E5RI56 91 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 GPC4O75487 556 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 DKK1O94907 266 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 VIPP01282 170 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 STX2P32856 288 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 CD151P48509 253 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 CSE1LP55060 971 aaKnown RBP14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 E2F1Q01094 437 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 HSPA14Q0VDF9 509 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 SLMAPQ14BN4 828 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 TMED2Q15363 201 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 OTOAQ7RTW8 1153 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 STRA8Q7Z7C7 330 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 FBF1Q8TES7 1133 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 ASZ1Q8WWH4 475 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 SH3KBP1Q96B97 665 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 RMDN2Q96LZ7 410 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 C12orf66Q96MD2 445 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 CCDC3Q9BQI4 270 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 AARSD1Q9BTE6 412 aaKnown RBP14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 OR52A5Q9H2C5 316 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 LATS2Q9NRM7 1088 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 POT1Q9NUX5 634 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 IMP3Q9NV31 184 aaKnown RBP14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 RABGEF1Q9UJ41 708 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 PSAT1Q9Y617 370 aa14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 CFAP20Q9Y6A4 193 aaKnown RBP14.14□□□□□ -0.15
DNMT3A-208ENST00000466601 GOLGA4Q13439 2230 aaKnown RBP14.13□□□□□ -0.15
DNMT3A-208ENST00000466601 IFRD1O00458 451 aaPredicted RBP14.13□□□□□ -0.15
DNMT3A-208ENST00000466601 PIAS1O75925 651 aa14.13□□□□□ -0.15
DNMT3A-208ENST00000466601 C1QAP02745 245 aa14.13□□□□□ -0.15
DNMT3A-208ENST00000466601 FAM153BP0C7A2 387 aa14.13□□□□□ -0.15
DNMT3A-208ENST00000466601 MTHFD1P11586 935 aaKnown RBP14.13□□□□□ -0.15
DNMT3A-208ENST00000466601 CDK4P11802 303 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms