RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 SHDQ96IW2 340 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 COPS8Q99627 209 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 GPR21Q99679 349 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 ECSITQ9BQ95 431 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 RTKNQ9BST9 563 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 FBRSQ9HAH7 460 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 SARS2Q9NP81 518 aaKnown RBP18.33■□□□□ 0.52
CAPN3-209ENST00000466222 ZDHHC3Q9NYG2 299 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 CNOT6Q9ULM6 557 aaKnown RBP18.33■□□□□ 0.52
CAPN3-209ENST00000466222 MRPS17Q9Y2R5 130 aaKnown RBP18.33■□□□□ 0.52
CAPN3-209ENST00000466222 A0A1W2PQU0 124 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 RGSL1A5PLK6 1076 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 SLCO1B7G3V0H7 640 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 ZNF7P17097 686 aaPredicted RBP18.32■□□□□ 0.52
CAPN3-209ENST00000466222 CHRM3P20309 590 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 ADSLP30566 484 aaPredicted RBP18.32■□□□□ 0.52
CAPN3-209ENST00000466222 ARRB2P32121 409 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 CREB5Q02930 508 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 WSCD2Q2TBF2 565 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 RAET1GQ6H3X3 334 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 ZYG11AQ6WRX3 759 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 CYP2U1Q7Z449 544 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 NRSN1Q8IZ57 195 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 SGF29Q96ES7 293 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 LENG8Q96PV6 779 aaPredicted RBP18.32■□□□□ 0.52
CAPN3-209ENST00000466222 ZSCAN5AQ9BUG6 496 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 CLPBQ9H078 707 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 ILKAPQ9H0C8 392 aaPredicted RBP18.32■□□□□ 0.52
CAPN3-209ENST00000466222 CCDC68Q9H2F9 335 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 COG4Q9H9E3 785 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 OXSMQ9NWU1 459 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 ACOT9Q9Y305 439 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 RAP2CQ9Y3L5 183 aa18.32■□□□□ 0.52
CAPN3-209ENST00000466222 CHURC1-FNTBB4DL54 471 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 SKAP2O75563 359 aaPredicted RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 SNUPNO95149 360 aaKnown RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 PDGFBP01127 241 aaPredicted RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 COX4I1P13073 169 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 NCF2P19878 526 aaPredicted RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 ASPHQ12797 758 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 LRRC32Q14392 662 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 CSHL1Q14406 222 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 PAQR3Q6TCH7 311 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 DHDDSQ86SQ9 333 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 KBTBD2Q8IY47 623 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 UBALD2Q8IYN6 164 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 BTN2A2Q8WVV5 523 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 TRAPPC9Q96Q05 1148 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 MYOCQ99972 504 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 FZD3Q9NPG1 666 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 DLGAP2Q9P1A6 1054 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 TSR3Q9UJK0 312 aaKnown RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 RUVBL2Q9Y230 463 aaKnown RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 RNGTTO60942 597 aaKnown RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 SLC25A14O95258 325 aaPredicted RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 TRIM16O95361 564 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 WISP3O95389 354 aaPredicted RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 PCCBP05166 539 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 CCDC166P0CW27 439 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 AKT1P31749 480 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 GPR1P46091 355 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 DGKEP52429 567 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 ADARP55265 1226 aaKnown RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 KLF10Q13118 480 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 PTRHD1Q6GMV3 140 aaKnown RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 IZUMO2Q6UXV1 221 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 ATG14Q6ZNE5 492 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 SYNPOQ8N3V7 929 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 POU5F2Q8N7G0 328 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 BEND7Q8N7W2 519 aaPredicted RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 ZNF781Q8N8C0 355 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 GLYATL1Q969I3 302 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 CNDP1Q96KN2 507 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 GPR78Q96P69 363 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 TTC1Q99614 292 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 TPSD1Q9BZJ3 242 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 CPSF2Q9P2I0 782 aaKnown RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 NFKBIL1Q9UBC1 381 aaPredicted RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 VTI1BQ9UEU0 232 aa18.31■□□□□ 0.52
CAPN3-209ENST00000466222 PRPF19Q9UMS4 504 aaKnown RBP18.31■□□□□ 0.52
CAPN3-209ENST00000466222 IGLV3-16A0A075B6K0 115 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 PFDN6O15212 129 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 RAD51BO15315 384 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 BAG2O95816 211 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 ESR1P03372 595 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 ITGAXP20702 1163 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 LIPMQ5VYY2 423 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 OR52E8Q6IFG1 317 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 PJA1Q8NG27 643 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 HEXDCQ8WVB3 486 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 RLN3Q8WXF3 142 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 LGR4Q9BXB1 951 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 DRC3Q9H069 523 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 POLMQ9NP87 494 aaPredicted RBP18.3■□□□□ 0.52
CAPN3-209ENST00000466222 TCF7L2Q9NQB0 619 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 IGSF5Q9NSI5 407 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 SPATS2LQ9NUQ6 558 aaKnown RBP18.3■□□□□ 0.52
CAPN3-209ENST00000466222 SMOXQ9NWM0 555 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 TAS2R13Q9NYV9 303 aa18.3■□□□□ 0.52
CAPN3-209ENST00000466222 NCKAP1Q9Y2A7 1128 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms