RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 CMTM7Q96FZ5 175 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ZSWIM3Q96MP5 696 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 GBA3Q9H227 469 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ACAD8Q9UKU7 415 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 BOKQ9UMX3 212 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 IGKV6-21A0A0C4DH24 114 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TRIM43BA6NCK2 446 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 MAGEB3O15480 346 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TRIM3O75382 744 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 HGFP14210 728 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 CPA3P15088 417 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 BMP7P18075 431 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 SOX11P35716 441 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 SRP54P61011 504 aaKnown RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 RPS15AP62244 130 aaKnown RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 PTPRCAPQ14761 206 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 PRAMEF14Q5SWL7 426 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 PRAMEF13Q5VWM6 474 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 AAGABQ6PD74 315 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TMPPEQ6ZT21 453 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TMPRSS11BQ86T26 416 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 AMIGO3Q86WK7 504 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 SMG8Q8ND04 991 aaKnown RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ASB15Q8WXK1 588 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TRIM43Q96BQ3 446 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ZNF354BQ96LW1 612 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TGM7Q96PF1 710 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ZIC5Q96T25 663 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 PADI1Q9ULC6 663 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ARL2BPQ9Y2Y0 163 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 A0A0G2JND7 137 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TMEM191CA6NGB0 347 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TFECO14948 347 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 CHGBP05060 677 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 COL6A2P12110 1019 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 NUDT2P50583 147 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ZXDAP98168 799 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TRA2AQ13595 282 aaKnown RBP eCLIP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ANGPT1Q15389 498 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ZSWIM7Q19AV6 140 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 HGSNATQ68CP4 663 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 SEL1L3Q68CR1 1132 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 FIGLAQ6QHK4 219 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 LRIG3Q6UXM1 1119 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 GPBAR1Q8TDU6 330 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 LINGO1Q96FE5 620 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 RAB9BQ9NP90 201 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 SCHIP1Q9P0W5 487 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 A8MVJ9 347 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 FTCDNL1E5RQL4 147 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 EPOP01588 193 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 MAPK12P53778 367 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 MANFP55145 182 aaKnown RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 RPS24P62847 133 aaKnown RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 FAM189BP81408 668 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 PRKG2Q13237 762 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 SERTAD2Q14140 314 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 CLCA4Q14CN2 919 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 NSDHLQ15738 373 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 SHROOM1Q2M3G4 852 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 C15orf59Q2T9L4 293 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 TMEM211Q6ICI0 200 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 CILP2Q8IUL8 1156 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 KIAA0895Q8NCT3 520 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 FBXO36Q8NEA4 188 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 ANKRD49Q8WVL7 239 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 HPF1Q9NWY4 346 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 SCN3BQ9NY72 215 aa9.31□□□□□ -0.92
SCAF11-205ENST00000465950 NOVA2Q9UNW9 492 aaKnown RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 MTO1Q9Y2Z2 717 aaKnown RBP9.31□□□□□ -0.92
SCAF11-205ENST00000465950 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 FAM237AA0A1B0GTK4 181 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 CIB4A0PJX0 185 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 PRORSD1PA6NEY8 169 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 TLR4O00206 839 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 WDPCPO95876 746 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 ATP1B2P14415 290 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-205ENST00000465950 SERPINB5P36952 375 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 PCBP4P57723 403 aaKnown RBP9.3□□□□□ -0.92
SCAF11-205ENST00000465950 TMEFF1Q8IYR6 380 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 ACMSDQ8TDX5 336 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 NOD2Q9HC29 1040 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 CHD4Q14839 1912 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 SKAP2O75563 359 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-205ENST00000465950 IL33O95760 270 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 PSMB4P28070 264 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 CHRNB3Q05901 458 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 CBX3Q13185 183 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 MROH9Q5TGP6 573 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 Q6ZSR6 202 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 XYLT1Q86Y38 959 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 P3H2Q8IVL5 708 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 PRSS58Q8IYP2 241 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 NDRG1Q92597 394 aaKnown RBP9.3□□□□□ -0.92
SCAF11-205ENST00000465950 RC3H2Q9HBD1 1191 aaKnown RBP9.3□□□□□ -0.92
SCAF11-205ENST00000465950 SCDO00767 359 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 S1PR4O95977 384 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 FCGR1AP12314 374 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 ARHGDIBP52566 201 aa9.3□□□□□ -0.92
SCAF11-205ENST00000465950 NAE1Q13564 534 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms