RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 KCNMB4Q86W47 210 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 DENND6AQ8IWF6 608 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 CNTN4Q8IWV2 1026 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 RBM12BQ8IXT5 1001 aaKnown RBP19.89■□□□□ 0.77
SKA3-205ENST00000465471 OTUD6BQ8N6M0 293 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 CEP112Q8N8E3 955 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 Q8N9G6 341 aaPredicted RBP19.89■□□□□ 0.77
SKA3-205ENST00000465471 UNC13CQ8NB66 2214 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 FBXO25Q8TCJ0 367 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 LKAAEAR1Q8TD35 194 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 INSM2Q96T92 566 aaPredicted RBP19.89■□□□□ 0.77
SKA3-205ENST00000465471 EPB41L5Q9HCM4 733 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 SLC40A1Q9NP59 571 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 FAM8A1Q9UBU6 413 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 ZC3H7BQ9UGR2 993 aaKnown RBP19.89■□□□□ 0.77
SKA3-205ENST00000465471 PSMD13Q9UNM6 376 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 SLC5A10A0PJK1 596 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 EIF3HO15372 352 aaKnown RBP eCLIP19.88■□□□□ 0.77
SKA3-205ENST00000465471 SLC35G4P0C7Q5 338 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 MTHFD1P11586 935 aaKnown RBP19.88■□□□□ 0.77
SKA3-205ENST00000465471 CD1CP29017 333 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 GPLD1P80108 840 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 BIRC2Q13490 618 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 CAMK2BQ13554 666 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 THOC5Q13769 683 aaKnown RBP19.88■□□□□ 0.77
SKA3-205ENST00000465471 SPIDRQ14159 915 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 CLPPQ16740 277 aaPredicted RBP19.88■□□□□ 0.77
SKA3-205ENST00000465471 ZNF789Q5FWF6 425 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 HP1BP3Q5SSJ5 553 aaPredicted RBP19.88■□□□□ 0.77
SKA3-205ENST00000465471 RBM44Q6ZP01 1051 aaKnown RBP19.88■□□□□ 0.77
SKA3-205ENST00000465471 TMEM26Q6ZUK4 368 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 MARCH9Q86YJ5 346 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 SPDYE1Q8NFV5 336 aaPredicted RBP19.88■□□□□ 0.77
SKA3-205ENST00000465471 CALML6Q8TD86 181 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 GFM1Q96RP9 751 aaKnown RBP19.88■□□□□ 0.77
SKA3-205ENST00000465471 FAM167BQ9BTA0 163 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.88■□□□□ 0.77
SKA3-205ENST00000465471 GNPTGQ9UJJ9 305 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 VPS9D1Q9Y2B5 631 aa19.88■□□□□ 0.77
SKA3-205ENST00000465471 PRAMEF33A0A0G2JMD5 474 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 ESYT3A0FGR9 886 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 FAM149AA5PLN7 773 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 IQCF5A8MTL0 148 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 PFDN6O15212 129 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 ZW10O43264 779 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 VIPP01282 170 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 ESR1P03372 595 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 JUPP14923 745 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 PDHA2P29803 388 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 ALDH4A1P30038 563 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 CCR7P32248 378 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 PREPP48147 710 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 CD151P48509 253 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 PLTPP55058 493 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 TARDBPQ13148 414 aaKnown RBP eCLIP19.87■□□□□ 0.77
SKA3-205ENST00000465471 CTBP1Q13363 440 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 ISXQ2M1V0 245 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 GLE1Q53GS7 698 aaKnown RBP19.87■□□□□ 0.77
SKA3-205ENST00000465471 HSP90AA5PQ58FG0 334 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 ZNF761Q86XN6 746 aaPredicted RBP19.87■□□□□ 0.77
SKA3-205ENST00000465471 ANKMY2Q8IV38 441 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 TRIM48Q8IWZ4 208 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 FBXO36Q8NEA4 188 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 ELMO1Q92556 727 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 CXorf40BQ96DE9 158 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 CERS2Q96G23 380 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 DEPDC7Q96QD5 511 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 SLC38A3Q99624 504 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 TSSK1BQ9BXA7 367 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 TMEM121BQ9BXQ6 578 aaPredicted RBP19.87■□□□□ 0.77
SKA3-205ENST00000465471 L2HGDHQ9H9P8 463 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 ZDHHC18Q9NUE0 388 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 KCNK4Q9NYG8 393 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 DMGDHQ9UI17 866 aaKnown RBP19.87■□□□□ 0.77
SKA3-205ENST00000465471 FBXO5Q9UKT4 447 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 CDYLQ9Y232 598 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 PCDHB1Q9Y5F3 818 aa19.87■□□□□ 0.77
SKA3-205ENST00000465471 ASPMQ8IZT6 3477 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 UBA6A0AVT1 1052 aaPredicted RBP19.86■□□□□ 0.77
SKA3-205ENST00000465471 ZNF500O60304 480 aaPredicted RBP19.86■□□□□ 0.77
SKA3-205ENST00000465471 GPC4O75487 556 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 ERVK-10P10266 1014 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 AOAHP28039 575 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 EIF3BP55884 814 aaKnown RBP19.86■□□□□ 0.77
SKA3-205ENST00000465471 PLOD1Q02809 727 aaPredicted RBP19.86■□□□□ 0.77
SKA3-205ENST00000465471 CFHR1Q03591 330 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 GPR18Q14330 331 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 TMPRSS9Q7Z410 1059 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 PDZD3Q86UT5 571 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 ZBED8Q8IZ13 594 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 C2CD4AQ8NCU7 369 aaPredicted RBP19.86■□□□□ 0.77
SKA3-205ENST00000465471 CFAP36Q96G28 342 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 C12orf66Q96MD2 445 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 FOXP3Q9BZS1 431 aa19.86■□□□□ 0.77
SKA3-205ENST00000465471 IARS2Q9NSE4 1012 aaKnown RBP19.86■□□□□ 0.77
SKA3-205ENST00000465471 ATXN7L1Q9ULK2 861 aaPredicted RBP19.86■□□□□ 0.77
SKA3-205ENST00000465471 H3BMM5 538 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 CSO75390 466 aaKnown RBP19.85■□□□□ 0.77
SKA3-205ENST00000465471 CPNE6O95741 557 aa19.85■□□□□ 0.77
SKA3-205ENST00000465471 CSF2RBP32927 897 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms