RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CTSL3PQ5NE16 218 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 ZNF470Q6ECI4 717 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 PTRHD1Q6GMV3 140 aaKnown RBP11.41□□□□□ -0.58
CUX1-207ENST00000465461 MRNIPQ6NTE8 343 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 C8orf74Q6P047 294 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 WASH2PQ6VEQ5 465 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 UNC5AQ6ZN44 842 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 ZNF574Q6ZN55 896 aaPredicted RBP11.41□□□□□ -0.58
CUX1-207ENST00000465461 RBM44Q6ZP01 1051 aaKnown RBP11.41□□□□□ -0.58
CUX1-207ENST00000465461 CAPN12Q6ZSI9 719 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 SDCCAG8Q86SQ7 713 aaPredicted RBP11.41□□□□□ -0.58
CUX1-207ENST00000465461 CILP2Q8IUL8 1156 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 PDIK1LQ8N165 341 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 DCBLD1Q8N8Z6 715 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 FBXO36Q8NEA4 188 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 HM13Q8TCT9 377 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 ATXN7L3BQ96GX2 97 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 SEMA6CQ9H3T2 930 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 WASH6PQ9NQA3 447 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 WHRNQ9P202 907 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 GALPQ9UBC7 116 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 ZC3H7BQ9UGR2 993 aaKnown RBP11.41□□□□□ -0.58
CUX1-207ENST00000465461 TSR3Q9UJK0 312 aaKnown RBP11.41□□□□□ -0.58
CUX1-207ENST00000465461 ENTPD2Q9Y5L3 495 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 TEX264Q9Y6I9 313 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 BPTFQ12830 3046 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 CACNA1AO00555 2505 aa11.41□□□□□ -0.58
CUX1-207ENST00000465461 PIKFYVEQ9Y2I7 2098 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 C17orf113A0A1B0GUU1 675 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 A0A1W2PNU3 283 aaPredicted RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 CTAGE15A4D2H0 777 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 TRABD2BA6NFA1 517 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 D6RAR5 112 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 PRMT5O14744 637 aaPredicted RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 NIPSNAP2O75323 286 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 S1PR4O95977 384 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 FTH1P02794 183 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 SLC35G4P0C7Q5 338 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 CTAGE8P0CG41 777 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 MTHFD1P11586 935 aaKnown RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 PPARGP37231 505 aaPredicted RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 SLC1A2P43004 574 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 ABCG1P45844 678 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 GPR3P46089 330 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 CARSP49589 748 aaKnown RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 FOXK2Q01167 660 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 GUCY2DQ02846 1103 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 CALCOCO2Q13137 446 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 TYSND1Q2T9J0 566 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 MAP9Q49MG5 647 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 SPANXN3Q5MJ09 141 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 CAPRIN2Q6IMN6 1127 aaKnown RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 TRMT10BQ6PF06 316 aaKnown RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 FOXR1Q6PIV2 292 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 ZDHHC24Q6UX98 284 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 TMEM26Q6ZUK4 368 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 CTAGE6Q86UF2 777 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 KCNMB4Q86W47 210 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 VRK3Q8IV63 474 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 CTAGE4Q8IX94 777 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 ZBED8Q8IZ13 594 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 MMGT1Q8N4V1 131 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 BBOF1Q8ND07 529 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 LRRN4CLQ8ND94 238 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 NCSTNQ92542 709 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 LPGAT1Q92604 370 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 ART4Q93070 314 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 AHCYL2Q96HN2 611 aaKnown RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 BIRC8Q96P09 236 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 DEPDC7Q96QD5 511 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 FERD3LQ96RJ6 166 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 CARD6Q9BX69 1037 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 ZMYND15Q9H091 742 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 RAB17Q9H0T7 212 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 OR52A5Q9H2C5 316 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 STN1Q9H668 368 aaKnown RBP11.4□□□□□ -0.58
CUX1-207ENST00000465461 SLC40A1Q9NP59 571 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 OGFRQ9NZT2 677 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 ACSL5Q9ULC5 683 aa11.4□□□□□ -0.58
CUX1-207ENST00000465461 NCOR2Q9Y618 2525 aa11.4□□□□□ -0.59
CUX1-207ENST00000465461 UNC13CQ8NB66 2214 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 SLC5A10A0PJK1 596 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 A8MU76 341 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 BHMG1C9JSJ3 638 aaPredicted RBP11.39□□□□□ -0.59
CUX1-207ENST00000465461 SMAPO00193 183 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 PIAS1O75925 651 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 HAUS5O94927 633 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 MPOP05164 745 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 HGFP14210 728 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 OGNP20774 298 aaKnown RBP11.39□□□□□ -0.59
CUX1-207ENST00000465461 HSPA14Q0VDF9 509 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 PRKG2Q13237 762 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 SYTL3Q4VX76 610 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 SNAP47Q5SQN1 464 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 PHF19Q5T6S3 580 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 CNSTQ6PJW8 725 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 RCBTB1Q8NDN9 531 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 MDM1Q8TC05 714 aa11.39□□□□□ -0.59
CUX1-207ENST00000465461 FBXO25Q8TCJ0 367 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms