RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 OSBPL9Q96SU4 736 aa16.1■□□□□ 0.17
COPS6-205ENST00000465027 PCDH9Q9HC56 1237 aa16.1■□□□□ 0.17
COPS6-205ENST00000465027 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
COPS6-205ENST00000465027 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.1■□□□□ 0.17
COPS6-205ENST00000465027 PKD2L2Q9NZM6 624 aa16.1■□□□□ 0.17
COPS6-205ENST00000465027 SEMA5BQ9P283 1151 aa16.1■□□□□ 0.17
COPS6-205ENST00000465027 SNX7Q9UNH6 387 aa16.1■□□□□ 0.17
COPS6-205ENST00000465027 SAR1BQ9Y6B6 198 aa16.1■□□□□ 0.17
COPS6-205ENST00000465027 F8P00451 2351 aa16.1■□□□□ 0.17
COPS6-205ENST00000465027 MFSD11O43934 449 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 PIRTP0C851 137 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 SSR1P43307 286 aaKnown RBP16.09■□□□□ 0.17
COPS6-205ENST00000465027 PDE1BQ01064 536 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 ACY1Q03154 408 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 MMRN1Q13201 1228 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 KYNUQ16719 465 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
COPS6-205ENST00000465027 ABRAXAS1Q6UWZ7 409 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 ZNF517Q6ZMY9 492 aaPredicted RBP16.09■□□□□ 0.17
COPS6-205ENST00000465027 LRRTM4Q86VH4 590 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 IQCKQ8N0W5 287 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 UBXN4Q92575 508 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 ALG3Q92685 438 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 FCRL4Q96PJ5 515 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 LYSMD1Q96S90 227 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 SMAD5Q99717 465 aaKnown RBP16.09■□□□□ 0.17
COPS6-205ENST00000465027 RAB33BQ9H082 229 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 RRAGDQ9NQL2 400 aaPredicted RBP16.09■□□□□ 0.17
COPS6-205ENST00000465027 RBM22Q9NW64 420 aaKnown RBP eCLIP16.09■□□□□ 0.17
COPS6-205ENST00000465027 SPTBP11277 2137 aa16.09■□□□□ 0.17
COPS6-205ENST00000465027 DIDO1Q9BTC0 2240 aaKnown RBP16.09■□□□□ 0.17
COPS6-205ENST00000465027 MASP2O00187 686 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 KMOO15229 486 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 HLA-DQB2P05538 268 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 RARAP10276 462 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 VARSP26640 1264 aaKnown RBP16.08■□□□□ 0.16
COPS6-205ENST00000465027 CA5AP35218 305 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 MARCKSL1P49006 195 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 ARL4DP49703 201 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 ZNF135P52742 658 aaPredicted RBP16.08■□□□□ 0.16
COPS6-205ENST00000465027 GALNT3Q14435 633 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 ANKRD20A8PQ5CZ79 823 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 PLEKHS1Q5SXH7 462 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 IZUMO3Q5VZ72 239 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 ALG1LQ6GMV1 187 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 VSIG1Q86XK7 387 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 GLIS1Q8NBF1 620 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 FAM71BQ8TC56 605 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 GLYATL1Q969I3 302 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 ZNF501Q96CX3 271 aaPredicted RBP16.08■□□□□ 0.16
COPS6-205ENST00000465027 TIMM29Q9BSF4 260 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 PCDH18Q9HCL0 1135 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 RNF14Q9UBS8 474 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 TCFL5Q9UL49 500 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 TMPRSS11EQ9UL52 423 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 DNPEPQ9ULA0 475 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 TTC7AQ9ULT0 858 aaPredicted RBP16.08■□□□□ 0.16
COPS6-205ENST00000465027 SHOC2Q9UQ13 582 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 APCP25054 2843 aa16.08■□□□□ 0.16
COPS6-205ENST00000465027 HNRNPRO43390 633 aaKnown RBP16.07■□□□□ 0.16
COPS6-205ENST00000465027 JCHAINP01591 159 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 CAPN1P07384 714 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 PTPN7P35236 360 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 ARCN1P48444 511 aaKnown RBP16.07■□□□□ 0.16
COPS6-205ENST00000465027 COPS2P61201 443 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 ABRQ12979 859 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 ELOAQ14241 798 aaKnown RBP16.07■□□□□ 0.16
COPS6-205ENST00000465027 CYB5D1Q6P9G0 228 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 FAM198BQ6UWH4 519 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 C11orf96Q7Z7L8 435 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 RCOR2Q8IZ40 523 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 D2HGDHQ8N465 521 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 CCHCR1Q8TD31 782 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 MAML1Q92585 1016 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 RBM41Q96IZ5 413 aaKnown RBP16.07■□□□□ 0.16
COPS6-205ENST00000465027 CDC23Q9UJX2 597 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 PSMD13Q9UNM6 376 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 PIKFYVEQ9Y2I7 2098 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 CSMD2Q7Z408 3487 aa16.07■□□□□ 0.16
COPS6-205ENST00000465027 MDC1Q14676 2089 aaKnown RBP16.06■□□□□ 0.16
COPS6-205ENST00000465027 ZNF487B1APH4 448 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 MEN1O00255 615 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 URI1O94763 535 aaPredicted RBP16.06■□□□□ 0.16
COPS6-205ENST00000465027 ZRANB2O95218 330 aaKnown RBP eCLIP16.06■□□□□ 0.16
COPS6-205ENST00000465027 MMP2P08253 660 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 CD48P09326 243 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 IDSP22304 550 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 SERPINB6P35237 376 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 ARSEP51690 589 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 TUBB4BP68371 445 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 PDK2Q15119 407 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 TAZQ16635 292 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 PTCHD3Q3KNS1 767 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 CRB2Q5IJ48 1285 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 AGAP9Q5VTM2 703 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 RAVER1Q8IY67 606 aaKnown RBP16.06■□□□□ 0.16
COPS6-205ENST00000465027 DSELQ8IZU8 1212 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 RASGEF1CQ8N431 466 aa16.06■□□□□ 0.16
COPS6-205ENST00000465027 COG1Q8WTW3 980 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms