RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 NUP85Q9BW27 656 aa5.36□□□□□ -1.55
CD46-211ENST00000464082 SLC17A9Q9BYT1 436 aa5.36□□□□□ -1.55
CD46-211ENST00000464082 CPEB1Q9BZB8 566 aaKnown RBP5.36□□□□□ -1.55
CD46-211ENST00000464082 CATSPERBQ9H7T0 1116 aa5.36□□□□□ -1.55
CD46-211ENST00000464082 MBNL1Q9NR56 388 aaKnown RBP5.36□□□□□ -1.55
CD46-211ENST00000464082 AASDHPPTQ9NRN7 309 aa5.36□□□□□ -1.55
CD46-211ENST00000464082 SCINQ9Y6U3 715 aa5.36□□□□□ -1.55
CD46-211ENST00000464082 U3KQA8 63 aa5.36□□□□□ -1.55
CD46-211ENST00000464082 SNRNP200O75643 2136 aaKnown RBP5.36□□□□□ -1.55
CD46-211ENST00000464082 MGAQ8IWI9 3026 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 CACNA1GO43497 2377 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 SDK2Q58EX2 2172 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 ANKRD62A6NC57 917 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 GOLGA6L19H0YKK7 550 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 TNFSF14O43557 240 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 DFNA5O60443 496 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 SDC3O75056 442 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 PIAS2O75928 621 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 RNF8O76064 485 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 PCDH8O95206 1070 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 RASGRP1O95267 797 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 POP4O95707 220 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 IGSF6O95976 241 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 PAK4O96013 591 aaPredicted RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 PRKCGP05129 697 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 THEGLP0DJG4 465 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 GRK6P43250 576 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 RECQLP46063 649 aaPredicted RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 DNA2P51530 1060 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 CLDN6P56747 220 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 C21orf59P57076 290 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 GEMIN4P57678 1058 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 RHOAP61586 193 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 RPS21P63220 83 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 SEMG2Q02383 582 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 SLC10A7Q0GE19 358 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 OVGP1Q12889 678 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 EIF2B5Q13144 721 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 DPYSL3Q14195 570 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 FZD2Q14332 565 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 PIGHQ14442 188 aaPredicted RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 SMAD1Q15797 465 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 SLC18A3Q16572 532 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 ST3GAL2Q16842 350 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 TMEM52BQ4KMG9 183 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 PPP6R3Q5H9R7 873 aaPredicted RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 CATSPEREQ5SY80 951 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 NCBP2-AS2Q69YL0 99 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 GDPD4Q6W3E5 623 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 CCNI2Q6ZMN8 369 aaPredicted RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 CLEC14AQ86T13 490 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 CAMK1DQ8IU85 385 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 VSTM4Q8IW00 320 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 ZC3H7AQ8IWR0 971 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 PELI3Q8N2H9 469 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 EID2Q8N6I1 236 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 PLA2G15Q8NCC3 412 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 HNRNPLLQ8WVV9 542 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 TEKT4Q8WW24 435 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 CASKIN2Q8WXE0 1202 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 ASB12Q8WXK4 309 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 RAB7BQ96AH8 199 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 FAF2Q96CS3 445 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 PPP1R16AQ96I34 528 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 CSPG4P5Q96PW8 444 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 TCEAL2Q9H3H9 227 aaPredicted RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 MRPL47Q9HD33 250 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 GDF3Q9NR23 364 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 ABHD10Q9NUJ1 306 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.35□□□□□ -1.55
CD46-211ENST00000464082 KLHL11Q9NVR0 708 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 RNF7Q9UBF6 113 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 DKK3Q9UBP4 350 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 UBA2Q9UBT2 640 aaPredicted RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 ANAPC7Q9UJX3 599 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 HPCAL4Q9UM19 191 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 COQ6Q9Y2Z9 468 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 LUC7L2Q9Y383 392 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 PCDHA9Q9Y5H5 950 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 BZW2Q9Y6E2 419 aaKnown RBP5.35□□□□□ -1.55
CD46-211ENST00000464082 IGSF10Q6WRI0 2623 aa5.35□□□□□ -1.55
CD46-211ENST00000464082 SMG1Q96Q15 3661 aaKnown RBP5.34□□□□□ -1.55
CD46-211ENST00000464082 SPTY2D1-AS1A0A0U1RR47 76 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 FAM149AA5PLN7 773 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 ARHGAP42A6NI28 874 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 C3orf70A6NLC5 250 aaPredicted RBP5.34□□□□□ -1.55
CD46-211ENST00000464082 A6NNZ2 444 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 CASC3O15234 703 aaKnown RBP5.34□□□□□ -1.55
CD46-211ENST00000464082 YKT6O15498 198 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 HTRA2O43464 458 aaPredicted RBP5.34□□□□□ -1.55
CD46-211ENST00000464082 TSPAN6O43657 245 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 MFSD11O43934 449 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 PRPSAP2O60256 369 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 NEBLO76041 1014 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 TRIM16O95361 564 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 MYF5P13349 255 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 PTMSP20962 102 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 DGKAP23743 735 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 AKT2P31751 481 aa5.34□□□□□ -1.55
CD46-211ENST00000464082 MMP12P39900 470 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms