RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 DUS1LQ6P1R4 473 aaKnown RBP20.21■□□□□ 0.83
CPSF7-209ENST00000463244 KDELC1Q6UW63 502 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 RHOT1Q8IXI2 618 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 BEND7Q8N7W2 519 aaPredicted RBP20.21■□□□□ 0.83
CPSF7-209ENST00000463244 RBMXL3Q8N7X1 1067 aaKnown RBP20.21■□□□□ 0.83
CPSF7-209ENST00000463244 CPT1BQ92523 772 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 PNPLA2Q96AD5 504 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 C12orf66Q96MD2 445 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 PPM1MQ96MI6 270 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 MFRPQ9BY79 579 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 SLC29A3Q9BZD2 475 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 WWP1Q9H0M0 922 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 KIR3DX1Q9H7L2 352 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 SOHLH2Q9NX45 425 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 SLC24A2Q9UI40 661 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 G3BP2Q9UN86 482 aaKnown RBP20.21■□□□□ 0.83
CPSF7-209ENST00000463244 OR6C74A6NCV1 312 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 EPOP01588 193 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 GYPCP04921 128 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 CAPN1P07384 714 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 VARSP26640 1264 aaKnown RBP20.2■□□□□ 0.82
CPSF7-209ENST00000463244 RORAP35398 523 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 VAV2P52735 878 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 ITGA1P56199 1179 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 WNT3AP56704 352 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 ABRQ12979 859 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 PRKD1Q15139 912 aaPredicted RBP20.2■□□□□ 0.82
CPSF7-209ENST00000463244 FAM69BQ5VUD6 431 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 SLC6A19Q695T7 634 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 ARMC6Q6NXE6 501 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 FBXO38Q6PIJ6 1188 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 RFX6Q8HWS3 928 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 TMEM102Q8N9M5 508 aaPredicted RBP20.2■□□□□ 0.82
CPSF7-209ENST00000463244 TLR10Q9BXR5 811 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 FANCEQ9HB96 536 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 SMOXQ9NWM0 555 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 HACD3Q9P035 362 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 ACSL5Q9ULC5 683 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 POLEQ07864 2286 aa20.2■□□□□ 0.82
CPSF7-209ENST00000463244 MGAT4DA6NG13 374 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 ZNF185O15231 689 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 NFKB1P19838 968 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 CHRNA4P43681 627 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 ARCN1P48444 511 aaKnown RBP20.19■□□□□ 0.82
CPSF7-209ENST00000463244 UBASH3AP57075 661 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 DYNLT1P63172 113 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 SLC18A3Q16572 532 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 LONRF2Q1L5Z9 754 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 FNBP1LQ5T0N5 605 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 FAM198BQ6UWH4 519 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 GLT6D1Q7Z4J2 308 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 SLC25A41Q8N5S1 370 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 GLIS1Q8NBF1 620 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 SPDYE1Q8NFV5 336 aaPredicted RBP20.19■□□□□ 0.82
CPSF7-209ENST00000463244 MRGPRX2Q96LB1 330 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 GPR83Q9NYM4 423 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 PKP3Q9Y446 797 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 PCSK5Q92824 1860 aa20.19■□□□□ 0.82
CPSF7-209ENST00000463244 FER1L5A0AVI2 2057 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 BUD23O43709 281 aaKnown RBP20.18■□□□□ 0.82
CPSF7-209ENST00000463244 LCA5LO95447 670 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 KRT1P04264 644 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 TMEM253P0C7T8 217 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 POLR2CP19387 275 aaPredicted RBP20.18■□□□□ 0.82
CPSF7-209ENST00000463244 MSH3P20585 1137 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 WASHC5Q12768 1159 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 SLC1A5Q15758 541 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 ZNF789Q5FWF6 425 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 MED25Q71SY5 747 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 DET1Q7L5Y6 550 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 SYTL1Q8IYJ3 562 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 ZBTB2Q8N680 514 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 OR2L2Q8NH16 312 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 PRR7Q8TB68 274 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 BLOC1S5Q8TDH9 187 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 CLIP3Q96DZ5 547 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 SMAD5Q99717 465 aaKnown RBP20.18■□□□□ 0.82
CPSF7-209ENST00000463244 SYTL2Q9HCH5 934 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 PCMTD2Q9NV79 361 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 POMT2Q9UKY4 750 aa20.18■□□□□ 0.82
CPSF7-209ENST00000463244 CCDC88CQ9P219 2028 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 KLHL33A6NCF5 533 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 WIPF3A6NGB9 483 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 SLC9B1P1A6NJY1 282 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 A6NL46 340 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 DDX3YO15523 660 aaKnown RBP20.17■□□□□ 0.82
CPSF7-209ENST00000463244 SLC35G4P0C7Q5 338 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 HLA-DPA1P20036 260 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 CDH3P22223 829 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 AKT1P31749 480 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 HNRNPH3P31942 346 aaKnown RBP20.17■□□□□ 0.82
CPSF7-209ENST00000463244 TNNT3P45378 269 aaPredicted RBP20.17■□□□□ 0.82
CPSF7-209ENST00000463244 NR2C2P49116 596 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 RRADP55042 308 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 PRKAA1Q13131 559 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 LRRC38Q5VT99 294 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 ZNF787Q6DD87 383 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 MAMDC2Q7Z304 686 aaPredicted RBP20.17■□□□□ 0.82
CPSF7-209ENST00000463244 OR1L3Q8NH93 324 aa20.17■□□□□ 0.82
CPSF7-209ENST00000463244 SLC35G2Q8TBE7 412 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms