RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 NDUFAF2Q8N183 169 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 BBS5Q8N3I7 341 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 ATPAF2Q8N5M1 289 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 GPR26Q8NDV2 337 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 GRHL3Q8TE85 626 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 PPP4R1Q8TF05 950 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 FAR1Q8WVX9 515 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 CPT1BQ92523 772 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 GLYATL1Q969I3 302 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 SGSM3Q96HU1 749 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 PPM1MQ96MI6 270 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 CSPG4P5Q96PW8 444 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 WDR77Q9BQA1 342 aaPredicted RBP7.51□□□□□ -1.21
SMC3-202ENST00000462899 TRIM56Q9BRZ2 755 aaKnown RBP7.51□□□□□ -1.21
SMC3-202ENST00000462899 MLPHQ9BV36 600 aaPredicted RBP7.51□□□□□ -1.21
SMC3-202ENST00000462899 NUP85Q9BW27 656 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 TRIM7Q9C029 511 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 POLR1EQ9GZS1 481 aaKnown RBP7.51□□□□□ -1.21
SMC3-202ENST00000462899 NT5MQ9NPB1 228 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 AGPAT4Q9NRZ5 378 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 PKD2L2Q9NZM6 624 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 COPG2Q9UBF2 871 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 PCSK1NQ9UHG2 260 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 RPL26L1Q9UNX3 145 aaKnown RBP7.51□□□□□ -1.21
SMC3-202ENST00000462899 DNAJC16Q9Y2G8 782 aa7.51□□□□□ -1.21
SMC3-202ENST00000462899 PRRC2AP48634 2157 aaKnown RBP7.51□□□□□ -1.21
SMC3-202ENST00000462899 HRNRQ86YZ3 2850 aaPredicted RBP7.51□□□□□ -1.21
SMC3-202ENST00000462899 A0A1B0GUH1 482 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 A0A1W2PQJ5 194 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 ANKRD62A6NC57 917 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 TMEM191CA6NGB0 347 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 MASP2O00187 686 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 DAPK3O43293 454 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 PRPSAP2O60256 369 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 CNOT3O75175 753 aaKnown RBP7.5□□□□□ -1.21
SMC3-202ENST00000462899 IPO13O94829 963 aaKnown RBP7.5□□□□□ -1.21
SMC3-202ENST00000462899 SLC25A14O95258 325 aaPredicted RBP7.5□□□□□ -1.21
SMC3-202ENST00000462899 LCA5LO95447 670 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 ALPPP05187 535 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 ATP1A3P13637 1013 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 TCF4P15884 667 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 IDSP22304 550 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 AMPD1P23109 780 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 PSMA2P25787 234 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 HADHAP40939 763 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 GLRBP48167 497 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 KRTAP10-9P60411 292 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 POLR2FP61218 127 aaKnown RBP7.5□□□□□ -1.21
SMC3-202ENST00000462899 NIPAL4Q0D2K0 466 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 ZNF630Q2M218 657 aaPredicted RBP7.5□□□□□ -1.21
SMC3-202ENST00000462899 TBCELQ5QJ74 424 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 DNTTIP2Q5QJE6 756 aaKnown RBP7.5□□□□□ -1.21
SMC3-202ENST00000462899 DUS1LQ6P1R4 473 aaKnown RBP7.5□□□□□ -1.21
SMC3-202ENST00000462899 DCUN1D2Q6PH85 259 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 TMCO3Q6UWJ1 677 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 TREML4Q6UXN2 200 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 BNC2Q6ZN30 1099 aaPredicted RBP7.5□□□□□ -1.21
SMC3-202ENST00000462899 FJX1Q86VR8 437 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 RAB43Q86YS6 212 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 TMEM151BQ8IW70 566 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 TRAM1L1Q8N609 369 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 OR1L3Q8NH93 324 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 FATE1Q969F0 183 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 CXorf40BQ96DE9 158 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 AGAP3Q96P47 875 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 IP6K3Q96PC2 410 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 DPH2Q9BQC3 489 aaPredicted RBP7.5□□□□□ -1.21
SMC3-202ENST00000462899 DHRS4Q9BTZ2 278 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 ZSCAN5AQ9BUG6 496 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 RUBCNLQ9H714 662 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 ZWILCHQ9H900 591 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 PCDH9Q9HC56 1237 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 TAS2R14Q9NYV8 317 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 AMACRQ9UHK6 382 aa7.5□□□□□ -1.21
SMC3-202ENST00000462899 ANKRD66B4E2M5 251 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 GADD45BO75293 160 aaPredicted RBP7.49□□□□□ -1.21
SMC3-202ENST00000462899 MTX2O75431 263 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 HLA-DQB2P05538 268 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 BPIP17213 487 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 CES1P23141 567 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 EPHB1P54762 984 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 OTUD4Q01804 1114 aaKnown RBP7.49□□□□□ -1.21
SMC3-202ENST00000462899 GALNT2Q10471 571 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 SSPNQ14714 243 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 PLCL1Q15111 1095 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 RPE65Q16518 533 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 PTCHD3Q3KNS1 767 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 HSP90AA4PQ58FG1 418 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 ANKRD20A8PQ5CZ79 823 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 TCP11X2Q5H9J9 407 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 B3GNTL1Q67FW5 361 aaPredicted RBP7.49□□□□□ -1.21
SMC3-202ENST00000462899 HGSNATQ68CP4 663 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 ACAD10Q6JQN1 1059 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 KLHL35Q6PF15 583 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 FBXO38Q6PIJ6 1188 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 FAM83HQ6ZRV2 1179 aaPredicted RBP7.49□□□□□ -1.21
SMC3-202ENST00000462899 TMC3Q7Z5M5 1100 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 PPP1R32Q7Z5V6 425 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 LRRC49Q8IUZ0 686 aa7.49□□□□□ -1.21
SMC3-202ENST00000462899 ZADH2Q8N4Q0 377 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms