RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 PPP3CCP48454 512 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 GSK3BP49841 420 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 RAB25P57735 213 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 CDH17Q12864 832 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 TSC22D1Q15714 1073 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 GTDC1Q4AE62 458 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 SPANXN3Q5MJ09 141 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 PIWIL4Q7Z3Z4 852 aaKnown RBP9.1□□□□□ -0.95
LINC01140-201ENST00000461990 DPP9Q86TI2 863 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 STK32CQ86UX6 486 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 TMC8Q8IU68 726 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 KIAA0319LQ8IZA0 1049 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 IPCEF1Q8WWN9 437 aaPredicted RBP9.1□□□□□ -0.95
LINC01140-201ENST00000461990 ZNF606Q8WXB4 792 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 ASB15Q8WXK1 588 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 COPS5Q92905 334 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 RBPMSQ93062 196 aaKnown RBP9.1□□□□□ -0.95
LINC01140-201ENST00000461990 LRRC58Q96CX6 371 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 ZSWIM3Q96MP5 696 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 TEPSINQ96N21 525 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 FOPNLQ96NB1 174 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 TRNT1Q96Q11 434 aaKnown RBP9.1□□□□□ -0.95
LINC01140-201ENST00000461990 ALG2Q9H553 416 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 PAK6Q9NQU5 681 aaPredicted RBP9.1□□□□□ -0.95
LINC01140-201ENST00000461990 FAM49BQ9NUQ9 324 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 COA4Q9NYJ1 87 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 C3orf18Q9UK00 162 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 RNF6Q9Y252 685 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 HES2Q9Y543 173 aa9.1□□□□□ -0.95
LINC01140-201ENST00000461990 BTN3A3O00478 584 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 XPNPEP2O43895 674 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 TPOP07202 933 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 EFNA1P20827 205 aaPredicted RBP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 ALAS2P22557 587 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 MAP2K6P52564 334 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 SNRPD2P62316 118 aaKnown RBP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 DGCR6Q14129 220 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 RAET1EQ8TD07 263 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 TSPEARQ8WU66 669 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 CERS2Q96G23 380 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 WBP1Q96G27 269 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 CGRRF1Q99675 332 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 CUEDC1Q9NWM3 386 aaPredicted RBP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 SCN3BQ9NY72 215 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 WRAP73Q9P2S5 460 aaPredicted RBP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 RAB23Q9ULC3 237 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 OR6C65A6NJZ3 312 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 TMEM233B4DJY2 109 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 USP2O75604 605 aaPredicted RBP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 HRH2P25021 359 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 CA5AP35218 305 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 BTN1A1Q13410 526 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 COL28A1Q2UY09 1125 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 UGT3A2Q3SY77 523 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 GNASQ5JWF2 1037 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 SLC35F1Q5T1Q4 408 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 LARP4Q71RC2 724 aaKnown RBP eCLIP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 C16orf62Q7Z3J2 963 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 ZC3HC1Q86WB0 502 aaKnown RBP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 P3H2Q8IVL5 708 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 UTP15Q8TED0 518 aaKnown RBP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 FRS2Q8WU20 508 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 ATOH1Q92858 354 aaPredicted RBP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 UPF1Q92900 1129 aaKnown RBP eCLIP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 PYCR2Q96C36 320 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 MOCOSQ96EN8 888 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 WDFY2Q96P53 400 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 BEX2Q9BXY8 128 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 ERVK13-1Q9NX77 482 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 MRPS7Q9Y2R9 242 aaKnown RBP9.09□□□□□ -0.95
LINC01140-201ENST00000461990 V9GYH0 126 aa9.09□□□□□ -0.95
LINC01140-201ENST00000461990 IRS2Q9Y4H2 1338 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 COL5A2P05997 1499 aaPredicted RBP9.08□□□□□ -0.96
LINC01140-201ENST00000461990 USP17L10C9JJH3 530 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 GATCO43716 136 aaKnown RBP9.08□□□□□ -0.96
LINC01140-201ENST00000461990 PGLSO95336 258 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 MATN4O95460 622 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 STARD3NLO95772 234 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 CYP11A1P05108 521 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 RPLP0P05388 317 aaKnown RBP9.08□□□□□ -0.96
LINC01140-201ENST00000461990 ARHGDIBP52566 201 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 ZNF143P52747 638 aaPredicted RBP9.08□□□□□ -0.96
LINC01140-201ENST00000461990 KEAP1Q14145 624 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 TRIP4Q15650 581 aaPredicted RBP9.08□□□□□ -0.96
LINC01140-201ENST00000461990 CAPN13Q6MZZ7 669 aaPredicted RBP9.08□□□□□ -0.96
LINC01140-201ENST00000461990 SLC46A3Q7Z3Q1 461 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 OR8H2Q8N162 312 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 ZC3HAV1LQ96H79 300 aaKnown RBP9.08□□□□□ -0.96
LINC01140-201ENST00000461990 NSMCE2Q96MF7 247 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 RNF157Q96PX1 679 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 SEC22CQ9BRL7 303 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 MMP28Q9H239 520 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 TMEM245Q9H330 911 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 HEXA-AS1Q9H8Q6 139 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 IL1RAPQ9NPH3 570 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 SLC52A3Q9NQ40 469 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 LIPT1Q9Y234 373 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 PQLC2LA1A4F0 135 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 SOWAHBA6NEL2 793 aa9.08□□□□□ -0.96
LINC01140-201ENST00000461990 MROH6A6NGR9 719 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms