RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 C12orf66Q96MD2 445 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 FCRL4Q96PJ5 515 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 INSM2Q96T92 566 aaPredicted RBP22.25■■□□□ 1.15
PTPN4-207ENST00000460162 TBL1YQ9BQ87 522 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 TRIM4Q9C037 500 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 LACRTQ9GZZ8 138 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 ARNT2Q9HBZ2 717 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 CROTQ9UKG9 612 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 RARRES3Q9UL19 164 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 KCTD3Q9Y597 815 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 CFAP20Q9Y6A4 193 aaKnown RBP22.25■■□□□ 1.15
PTPN4-207ENST00000460162 IGHV5-51A0A0C4DH38 117 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 CFAP99D6REC4 459 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 ACY1Q03154 408 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 DUS1LQ6P1R4 473 aaKnown RBP22.24■■□□□ 1.15
PTPN4-207ENST00000460162 SNX20Q7Z614 316 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 BPHLQ86WA6 291 aaPredicted RBP22.24■■□□□ 1.15
PTPN4-207ENST00000460162 CARFQ8N187 725 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 NXPE1Q8N323 547 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 ACRBPQ8NEB7 543 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 HM13Q8TCT9 377 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 KIR3DX1Q9H7L2 352 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 SLC24A2Q9UI40 661 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 KCND3Q9UK17 655 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 PCDHB3Q9Y5E6 796 aa22.24■■□□□ 1.15
PTPN4-207ENST00000460162 MRPS18BQ9Y676 258 aaKnown RBP22.24■■□□□ 1.15
PTPN4-207ENST00000460162 GOLGA6L9A6NEM1 432 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 SGTAO43765 313 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 F8A1P23610 371 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 DENND5AQ6IQ26 1287 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 AADACL2Q6P093 401 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 C16orf46Q6P387 395 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 TTC13Q8NBP0 860 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 C9orf43Q8TAL5 461 aaPredicted RBP22.23■■□□□ 1.15
PTPN4-207ENST00000460162 RMDN2Q96LZ7 410 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 COPS8Q99627 209 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 MAP3K3Q99759 626 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 HRASLS2Q9NWW9 162 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 FAM8A1Q9UBU6 413 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 PCDHGA6Q9Y5G7 932 aa22.23■■□□□ 1.15
PTPN4-207ENST00000460162 CCNYL3P0C7X3 344 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 FOLR1P15328 257 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 NDUFS1P28331 727 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 ARL4DP49703 201 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 SEPT6Q14141 434 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 DEFB109BQ30KR1 87 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 GPR33Q49SQ1 333 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 ATP1A1-AS1Q5TC04 95 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 ARHGEF18Q6ZSZ5 1173 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 KIAA1328Q86T90 577 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 SYCE1Q8N0S2 351 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 UBL4BQ8N7F7 174 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 SPDYE1Q8NFV5 336 aaPredicted RBP22.22■■□□□ 1.15
PTPN4-207ENST00000460162 NAT14Q8WUY8 206 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 CCM2Q9BSQ5 444 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 HEBP2Q9Y5Z4 205 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 COLEC10Q9Y6Z7 277 aa22.22■■□□□ 1.15
PTPN4-207ENST00000460162 UBA6A0AVT1 1052 aaPredicted RBP22.21■■□□□ 1.15
PTPN4-207ENST00000460162 MIF4GDA9UHW6 222 aaKnown RBP22.21■■□□□ 1.15
PTPN4-207ENST00000460162 LDB2O43679 373 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 TIAF1O95411 115 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 PTMAP06454 111 aaKnown RBP22.21■■□□□ 1.15
PTPN4-207ENST00000460162 EBLN1P0CF75 366 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 HSD11B2P80365 405 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 KCNAB1Q14722 419 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 KCTD11Q693B1 232 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 CAPRIN2Q6IMN6 1127 aaKnown RBP22.21■■□□□ 1.15
PTPN4-207ENST00000460162 ARMC6Q6NXE6 501 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 PEX26Q7Z412 305 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 TXLNBQ8N3L3 684 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 RNF31Q96EP0 1072 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 RBSNQ9H1K0 784 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 LHX9Q9NQ69 397 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 FGF21Q9NSA1 209 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 AMFRQ9UKV5 643 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 PADI1Q9ULC6 663 aa22.21■■□□□ 1.15
PTPN4-207ENST00000460162 IGLV3-16A0A075B6K0 115 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 TRBV5-4A0A0C4DH59 114 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 C17orf113A0A1B0GUU1 675 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 C21orf140B9A014 251 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 H7C0S8 307 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 MATN2O00339 956 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 ZBTB11O95625 1053 aaPredicted RBP22.2■■□□□ 1.14
PTPN4-207ENST00000460162 RECKO95980 971 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 ATP1B2P14415 290 aaPredicted RBP22.2■■□□□ 1.14
PTPN4-207ENST00000460162 MC4RP32245 332 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 TMPRSS15P98073 1019 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 DNASE1L3Q13609 305 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 SPARCL1Q14515 664 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 GSE1Q14687 1217 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 PARP6Q2NL67 630 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 P3H1Q32P28 736 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 PWWP2BQ6NUJ5 590 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 D2HGDHQ8N465 521 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 DNAJC1Q96KC8 554 aaKnown RBP22.2■■□□□ 1.14
PTPN4-207ENST00000460162 LRRC40Q9H9A6 602 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 VPS37BQ9H9H4 285 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 ZDHHC3Q9NYG2 299 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 ANAPC2Q9UJX6 822 aa22.2■■□□□ 1.14
PTPN4-207ENST00000460162 POLHQ9Y253 713 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms