RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 NENFQ9UMX5 172 aa4.02□□□□□ -1.77
UBDP1-202ENST00000457888 COL4A4P53420 1690 aaPredicted RBP4.02□□□□□ -1.77
UBDP1-202ENST00000457888 MYOFQ9NZM1 2061 aa4.02□□□□□ -1.77
UBDP1-202ENST00000457888 MUC6Q6W4X9 2439 aa4.02□□□□□ -1.77
UBDP1-202ENST00000457888 FRYLO94915 3013 aa4.02□□□□□ -1.77
UBDP1-202ENST00000457888 PIEZO1Q92508 2521 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 SF3B1O75533 1304 aaKnown RBP eCLIP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 LOC105369274A0A096LPK9 316 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 LOC102723532A0A0G2JNH3 316 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 FAM92AA1XBS5 289 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 O00370 1275 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 ZNF263O14978 683 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CTIFO43310 598 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TRAPPC3O43617 180 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 WDR47O94967 919 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 FGFR1OPO95684 399 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 GYPCP04921 128 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 FYNP06241 537 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 PLEKP08567 350 aaPredicted RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 HAPLN1P10915 354 aaPredicted RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 ODC1P11926 461 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 SKILP12757 684 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CCDC130P13994 396 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CD58P19256 250 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 KLRC2P26717 231 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 HNRNPH3P31942 346 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 PNPLA4P41247 253 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 PIK3CAP42336 1068 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 RXRGP48443 463 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 LHX1P48742 406 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 PAPOLAP51003 745 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 ZNF75DP51815 510 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 POLR2FP61218 127 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 MYL7Q01449 175 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 PTP4A2Q12974 167 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TRPC3Q13507 836 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 SMC1AQ14683 1233 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 SMAD1Q15797 465 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CYP1B1Q16678 543 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TPD52L1Q16890 204 aaPredicted RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 P3H1Q32P28 736 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 KRTAP27-1Q3LI81 207 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CTXN3Q4LDR2 81 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 MDH1BQ5I0G3 518 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 AARS2Q5JTZ9 985 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 ARHGAP17Q68EM7 881 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 ANKRD54Q6NXT1 300 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 PMF1Q6P1K2 205 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 DENND1BQ6P3S1 775 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 ANKRD16Q6P6B7 361 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TMEM270Q6UE05 265 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CLEC20AQ6ZU45 233 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 RSRC2Q7L4I2 434 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 RAB11FIP2Q7L804 512 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 DNAJB7Q7Z6W7 309 aaPredicted RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 PCGF5Q86SE9 256 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TRABD2AQ86V40 505 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 UNC93AQ86WB7 457 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TMC8Q8IU68 726 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TMEM139Q8IV31 216 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 VSTM4Q8IW00 320 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 OR4N4Q8N0Y3 316 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TC2NQ8N9U0 490 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 APPL2Q8NEU8 664 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 UBA3Q8TBC4 463 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 SPATA18Q8TC71 538 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 SLC20A1Q8WUM9 679 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 HMGB4Q8WW32 186 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 WBP2Q969T9 261 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 MYLPFQ96A32 169 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CTHRC1Q96CG8 243 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 C5orf34Q96MH7 638 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 SLC22A12Q96S37 553 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 MMS19Q96T76 1030 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CHP1Q99653 195 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 SYT15Q9BQS2 421 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 RPP25Q9BUL9 199 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 NAT10Q9H0A0 1025 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 IL21RQ9HBE5 538 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CSNK1G1Q9HCP0 422 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TRIM36Q9NQ86 728 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TLR8Q9NR97 1041 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 MRPL17Q9NRX2 175 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 FAM207AQ9NSI2 230 aaPredicted RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 HCFC1R1Q9NWW0 138 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 OSER1Q9NX31 292 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 TAS2R14Q9NYV8 317 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 AIPL1Q9NZN9 384 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 GCNT4Q9P109 453 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 STEAP1Q9UHE8 339 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 NOCTQ9UK39 431 aaKnown RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 FBXW11Q9UKB1 542 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 CDH9Q9ULB4 789 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 C19orf53Q9UNZ5 99 aaPredicted RBP4.01□□□□□ -1.77
UBDP1-202ENST00000457888 DNAJC16Q9Y2G8 782 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 MYH10P35580 1976 aa4.01□□□□□ -1.77
UBDP1-202ENST00000457888 A0A0U1RQJ8 604 aa4□□□□□ -1.77
UBDP1-202ENST00000457888 TCRBV5S1A1TA0A578 114 aa4□□□□□ -1.77
UBDP1-202ENST00000457888 FAM170AA1A519 330 aa4□□□□□ -1.77
UBDP1-202ENST00000457888 FAM90A10PA6NDY2 464 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms