RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 PDHA2P29803 388 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 FMO4P31512 558 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 NOVA1P51513 510 aaKnown RBP18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 RPA4Q13156 261 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 PUM1Q14671 1186 aaKnown RBP eCLIP18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 NR0B2Q15466 257 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 KYNUQ16719 465 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 PERM1Q5SV97 790 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 SLC26A11Q86WA9 606 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 GSPT2Q8IYD1 628 aaKnown RBP18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 AARSD1Q9BTE6 412 aaKnown RBP18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 VPS37BQ9H9H4 285 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 RRAGDQ9NQL2 400 aaPredicted RBP18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 NCKIPSDQ9NZQ3 722 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 GALPQ9UBC7 116 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 RABGEF1Q9UJ41 708 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 ACSL5Q9ULC5 683 aa18.26■□□□□ 0.51
SBDSP1-205ENST00000456312 KIR2DS5A0A0G2JLQ3 304 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 A0A0G2JNG1 304 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 OR5K4A6NMS3 321 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 KIR2DS3K7RE56 304 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 LIN7AO14910 233 aaPredicted RBP18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 PFDN6O15212 129 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 SNX2O60749 519 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 XRCC1P18887 633 aaPredicted RBP18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 SLC19A1P41440 591 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 CLCN7P51798 805 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 KIR2DS5Q14953 304 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 SLCO6A1Q86UG4 719 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 VRK3Q8IV63 474 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 SPNS2Q8IVW8 549 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 CFAP206Q8IYR0 622 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 SPDYE1Q8NFV5 336 aaPredicted RBP18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 GIMAP7Q8NHV1 300 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 ELMO1Q92556 727 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 KCNJ9Q92806 393 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 PANX3Q96QZ0 392 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 EPB41L4BQ9H329 900 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 SARS2Q9NP81 518 aaKnown RBP18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 ZFATQ9P243 1243 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 PADI4Q9UM07 663 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 PCDHGA1Q9Y5H4 931 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 RNF215Q9Y6U7 377 aa18.25■□□□□ 0.51
SBDSP1-205ENST00000456312 PCM1Q15154 2024 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 SPAARA0A1B0GVQ0 90 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 H3BMM5 538 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 PPM1DO15297 605 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 NUDT21O43809 227 aaKnown RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 SLCO2B1O94956 709 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 GP1BAP07359 652 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 PNLIPP16233 465 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 GLB1P16278 677 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 ITGB6P18564 788 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 CD9P21926 228 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 ACADLP28330 430 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 PREPP48147 710 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 VSNL1P62760 191 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 SEPT7Q16181 437 aaKnown RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 KBTBD12Q3ZCT8 623 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 RBM20Q5T481 1227 aaKnown RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 PTRHD1Q6GMV3 140 aaKnown RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 WDR93Q6P2C0 686 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 NAPRTQ6XQN6 538 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 CCNI2Q6ZMN8 369 aaPredicted RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 ZC3HC1Q86WB0 502 aaKnown RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 GABPB2Q8TAK5 448 aaPredicted RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 FBF1Q8TES7 1133 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 GLMNQ92990 594 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 INSM2Q96T92 566 aaPredicted RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 SLC30A3Q99726 388 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 WWP1Q9H0M0 922 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 PPANQ9NQ55 473 aaKnown RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 CORO1CQ9ULV4 474 aaPredicted RBP18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 COMMD10Q9Y6G5 202 aa18.24■□□□□ 0.51
SBDSP1-205ENST00000456312 ADAMTS20P59510 1910 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 PRAMEF33A0A0G2JMD5 474 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 OR52A4PA6NMU1 304 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 F8W8V4 182 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 CASC3O15234 703 aaKnown RBP18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 TRIM16O95361 564 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 SLC2A4P14672 509 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 STX2P32856 288 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 ABCG1P45844 678 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 CD151P48509 253 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 RPIAP49247 311 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 DAB2P98082 770 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 ILKQ13418 452 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 SLMAPQ14BN4 828 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 EFTUD2Q15029 972 aaKnown RBP eCLIP18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 RPE65Q16518 533 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 ERCC6LQ2NKX8 1250 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 PDZD3Q86UT5 571 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 SLC22A15Q8IZD6 547 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 ACVR1CQ8NER5 493 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 OR6C4Q8NGE1 309 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 MAPK15Q8TD08 544 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 NAT6Q93015 286 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 ACSS3Q9H6R3 686 aa18.23■□□□□ 0.51
SBDSP1-205ENST00000456312 POT1Q9NUX5 634 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms