RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 CAPN5O15484 640 aaPredicted RBP24.31■■□□□ 1.48
MSH2-203ENST00000454849 KIF1CO43896 1103 aaKnown RBP24.31■■□□□ 1.48
MSH2-203ENST00000454849 ITGB6P18564 788 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 PDHA2P29803 388 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 PPP1CAP62136 330 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 KCNJ11Q14654 390 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 CYP1B1Q16678 543 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 PHC3Q8NDX5 983 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 HM13Q8TCT9 377 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 NRTNQ99748 197 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 CTRCQ99895 268 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 COG4Q9H9E3 785 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 SLC39A1Q9NY26 324 aa24.31■■□□□ 1.48
MSH2-203ENST00000454849 PHF2O75151 1096 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 TPSB2P20231 275 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 NPY2RP49146 381 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 SEPHS1P49903 392 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 ACVR1Q04771 509 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 PLCL1Q15111 1095 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 TPSAB1Q15661 275 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 IRGCQ6NXR0 463 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 LRRC8BQ6P9F7 803 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 FAM92BQ6ZTR7 304 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 NLRP9Q7RTR0 991 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 ARHGAP22Q7Z5H3 698 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 PLXDC1Q8IUK5 500 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 C17orf53Q8N3J3 647 aaPredicted RBP24.3■■□□□ 1.48
MSH2-203ENST00000454849 MPP5Q8N3R9 675 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 CPT1BQ92523 772 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.3■■□□□ 1.483e-9■■■■■ 78.5
MSH2-203ENST00000454849 TRIM56Q9BRZ2 755 aaKnown RBP24.3■■□□□ 1.48
MSH2-203ENST00000454849 CPNE5Q9HCH3 593 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 NEU2Q9Y3R4 380 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 PCDHGA7Q9Y5G6 932 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 NBEAQ8NFP9 2946 aa24.3■■□□□ 1.48
MSH2-203ENST00000454849 NVLO15381 856 aaKnown RBP24.29■■□□□ 1.48
MSH2-203ENST00000454849 TMEM63AO94886 807 aa24.29■■□□□ 1.48
MSH2-203ENST00000454849 MLLT3P42568 568 aaPredicted RBP24.29■■□□□ 1.48
MSH2-203ENST00000454849 CSE1LP55060 971 aaKnown RBP24.29■■□□□ 1.48
MSH2-203ENST00000454849 CLN3Q13286 438 aa24.29■■□□□ 1.48
MSH2-203ENST00000454849 KRT33BQ14525 404 aa24.29■■□□□ 1.48
MSH2-203ENST00000454849 ZNF658BQ4V348 819 aaPredicted RBP24.29■■□□□ 1.48
MSH2-203ENST00000454849 FASTKD1Q53R41 847 aaKnown RBP24.29■■□□□ 1.48
MSH2-203ENST00000454849 CAPRIN2Q6IMN6 1127 aaKnown RBP24.29■■□□□ 1.48
MSH2-203ENST00000454849 PDZD3Q86UT5 571 aa24.29■■□□□ 1.48
MSH2-203ENST00000454849 MFSD3Q96ES6 412 aa24.29■■□□□ 1.48
MSH2-203ENST00000454849 IL22Q9GZX6 179 aa24.29■■□□□ 1.48
MSH2-203ENST00000454849 EPB41L1Q9H4G0 881 aa24.29■■□□□ 1.48
MSH2-203ENST00000454849 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.29■■□□□ 1.48
MSH2-203ENST00000454849 RIMKLBQ9ULI2 386 aa24.29■■□□□ 1.48
MSH2-203ENST00000454849 AHCTF1Q8WYP5 2266 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.28■■□□□ 1.48
MSH2-203ENST00000454849 GOLGA8KD6RF30 607 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 GOLGA8TH3BQL2 631 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 RASSF9O75901 435 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 NSG1P42857 185 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 ARCN1P48444 511 aaKnown RBP24.28■■□□□ 1.48
MSH2-203ENST00000454849 SRSF6Q13247 344 aaKnown RBP24.28■■□□□ 1.48
MSH2-203ENST00000454849 CAND1Q86VP6 1230 aaKnown RBP24.28■■□□□ 1.48
MSH2-203ENST00000454849 RBM12BQ8IXT5 1001 aaKnown RBP24.28■■□□□ 1.48
MSH2-203ENST00000454849 ELMO1Q92556 727 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 C9orf72Q96LT7 481 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 FERD3LQ96RJ6 166 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 DDX47Q9H0S4 455 aaKnown RBP24.28■■□□□ 1.48
MSH2-203ENST00000454849 TREX1Q9NSU2 369 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 CATSPERZQ9NTU4 200 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 B3GALT1Q9Y5Z6 326 aa24.28■■□□□ 1.48
MSH2-203ENST00000454849 GOLGA6L10A0A0M3HER8 536 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 IQCF5A8MTL0 148 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 AP2A2O94973 939 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 CAPZBP47756 277 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 CXADRP78310 365 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 CDK16Q00536 496 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 ITIH4Q14624 930 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 ANKS6Q68DC2 871 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 CASC4Q6P4E1 433 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 OTUD6BQ8N6M0 293 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 TAAR9Q96RI9 348 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 OR52A5Q9H2C5 316 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 VPS37BQ9H9H4 285 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 APMAPQ9HDC9 416 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 SLC24A2Q9UI40 661 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.27■■□□□ 1.48
MSH2-203ENST00000454849 PTPRQQ9UMZ3 2332 aa24.27■■□□□ 1.48
MSH2-203ENST00000454849 C17orf113A0A1B0GUU1 675 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 KLHL33A6NCF5 533 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 CD3EAPO15446 510 aaKnown RBP24.26■■□□□ 1.47
MSH2-203ENST00000454849 VAPBO95292 243 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 C9P02748 559 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 PRKG2Q13237 762 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 BOP1Q14137 746 aaKnown RBP24.26■■□□□ 1.47
MSH2-203ENST00000454849 LYPLAL1Q5VWZ2 237 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 PACS1Q6VY07 963 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 BMPERQ8N8U9 685 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 OR4E2Q8NGC2 313 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 DPH1Q9BZG8 443 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 IL1RAPL1Q9NZN1 696 aa24.26■■□□□ 1.47
MSH2-203ENST00000454849 MN1Q10571 1320 aaPredicted RBP24.26■■□□□ 1.47
MSH2-203ENST00000454849 PIKFYVEQ9Y2I7 2098 aa24.25■■□□□ 1.47
MSH2-203ENST00000454849 OR6C74A6NCV1 312 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms