RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PRLHRP49683 370 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 HNRNPKP61978 463 aaKnown RBP eCLIP15.38■□□□□ 0.05
VCX3B-204ENST00000453306 CTBSQ01459 385 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 SLMAPQ14BN4 828 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 TBC1D25Q3MII6 688 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 PLA2G4EQ3MJ16 856 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 RBM20Q5T481 1227 aaKnown RBP15.38■□□□□ 0.05
VCX3B-204ENST00000453306 LYPLAL1Q5VWZ2 237 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 SDCCAG8Q86SQ7 713 aaPredicted RBP15.38■□□□□ 0.05
VCX3B-204ENST00000453306 LSMEM2Q8N112 164 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 OTUD6BQ8N6M0 293 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 ZNF548Q8NEK5 533 aaPredicted RBP15.38■□□□□ 0.05
VCX3B-204ENST00000453306 GPBAR1Q8TDU6 330 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 DCUN1D1Q96GG9 259 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 DEPDC7Q96QD5 511 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 OR2M4Q96R27 311 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 SLC30A3Q99726 388 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 FAM167BQ9BTA0 163 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 RMI1Q9H9A7 625 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 SPATS2LQ9NUQ6 558 aaKnown RBP15.38■□□□□ 0.05
VCX3B-204ENST00000453306 NLGN3Q9NZ94 848 aa15.38■□□□□ 0.05
VCX3B-204ENST00000453306 APOBEC3BQ9UH17 382 aaKnown RBP15.38■□□□□ 0.05
VCX3B-204ENST00000453306 HELZ2Q9BYK8 2649 aaKnown RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 HMX2A2RU54 273 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 H3BM21 787 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 PRMT5O14744 637 aaPredicted RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 ATXN7O15265 892 aaPredicted RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 YY2O15391 372 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 NIPSNAP2O75323 286 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 ACP5P13686 325 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 ZNF7P17097 686 aaPredicted RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 ITGB6P18564 788 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 RPS3P23396 243 aaKnown RBP eCLIP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 GCAP28676 217 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 NSG1P42857 185 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 EIF3BP55884 814 aaKnown RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 SLC29A2Q14542 456 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 PRRT3Q5FWE3 981 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 AARS2Q5JTZ9 985 aaKnown RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 ZNF449Q6P9G9 518 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 TRMT10CQ7L0Y3 403 aaKnown RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 CHST15Q7LFX5 561 aaPredicted RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 GPR155Q7Z3F1 870 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 GALNT13Q8IUC8 556 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 TRAPPC5Q8IUR0 188 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 MYRIPQ8NFW9 859 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 LMX1AQ8TE12 382 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 HEXDCQ8WVB3 486 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 SLC39A7Q92504 469 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 COL26A1Q96A83 441 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 LINC00615Q96LM1 132 aaPredicted RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 NDNQ99608 321 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 ABCG4Q9H172 646 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 ACSS3Q9H6R3 686 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 INTS10Q9NVR2 710 aaKnown RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 TRNAU1APQ9NX07 287 aaKnown RBP15.37■□□□□ 0.05
VCX3B-204ENST00000453306 NCKIPSDQ9NZQ3 722 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 GPR34Q9UPC5 381 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 KCNK6Q9Y257 313 aa15.37■□□□□ 0.05
VCX3B-204ENST00000453306 TEX51A0A1B0GUA7 166 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 UBA6A0AVT1 1052 aaPredicted RBP15.36■□□□□ 0.05
VCX3B-204ENST00000453306 GPR89AB7ZAQ6 455 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 SHBGP04278 402 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 GPR89BP0CG08 455 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 CCR7P32248 378 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 ADARP55265 1226 aaKnown RBP15.36■□□□□ 0.05
VCX3B-204ENST00000453306 NFE2L1Q14494 772 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 BROXQ5VW32 411 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 CEP128Q6ZU80 1094 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 STRA8Q7Z7C7 330 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 GALNT7Q86SF2 657 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 LRRTM4Q86VH4 590 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 ZC3HC1Q86WB0 502 aaKnown RBP15.36■□□□□ 0.05
VCX3B-204ENST00000453306 LMNTD2Q8IXW0 634 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 PPM1NQ8N819 430 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 FAM181AQ8N9Y4 354 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 ZNF248Q8NDW4 579 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 CALML6Q8TD86 181 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 CAVIN3Q969G5 261 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 FAM136AQ96C01 138 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 ZNF578Q96N58 590 aaPredicted RBP15.36■□□□□ 0.05
VCX3B-204ENST00000453306 TTC25Q96NG3 672 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 SCHIP1Q9P0W5 487 aaPredicted RBP15.36■□□□□ 0.05
VCX3B-204ENST00000453306 TBC1D29Q9UFV1 150 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 CDYLQ9Y232 598 aa15.36■□□□□ 0.05
VCX3B-204ENST00000453306 SMG1Q96Q15 3661 aaKnown RBP15.35■□□□□ 0.05
VCX3B-204ENST00000453306 A6NCN8 305 aa15.35■□□□□ 0.05
VCX3B-204ENST00000453306 KMOO15229 486 aa15.35■□□□□ 0.05
VCX3B-204ENST00000453306 OPA1O60313 960 aa15.35■□□□□ 0.05
VCX3B-204ENST00000453306 SPAG6O75602 509 aa15.35■□□□□ 0.05
VCX3B-204ENST00000453306 AP2A2O94973 939 aa15.35■□□□□ 0.05
VCX3B-204ENST00000453306 ABHD2P08910 425 aa15.35■□□□□ 0.05
VCX3B-204ENST00000453306 MYF5P13349 255 aa15.35■□□□□ 0.05
VCX3B-204ENST00000453306 PKMP14618 531 aaKnown RBP15.35■□□□□ 0.05
VCX3B-204ENST00000453306 BRAFP15056 766 aa15.35■□□□□ 0.05
VCX3B-204ENST00000453306 PDHA2P29803 388 aa15.35■□□□□ 0.05
VCX3B-204ENST00000453306 PBLDP30039 288 aaPredicted RBP15.35■□□□□ 0.05
VCX3B-204ENST00000453306 HSD17B3P37058 310 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms