RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 GPR150Q8NGU9 434 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 ZNF669Q96BR6 464 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-202ENST00000452372 GRAMD1AQ96CP6 724 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 STAMBPL1Q96FJ0 436 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 SYNDIG1Q9H7V2 258 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 KCNK4Q9NYG8 393 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 FAM8A1Q9UBU6 413 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 PSMD13Q9UNM6 376 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 SNX24Q9Y343 169 aa19.53■□□□□ 0.72
COL9A3-202ENST00000452372 GCN1Q92616 2671 aaKnown RBP19.53■□□□□ 0.72
COL9A3-202ENST00000452372 IGHV1OR21-1A0A087WYE8 117 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 ZCWPW2A0A1B0GU75 182 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 OR52A4PA6NMU1 304 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 D6RAR5 112 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 GOLGA8KD6RF30 607 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 F8W8V4 182 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 GOLGA8TH3BQL2 631 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 NDC80O14777 642 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 FTH1P02794 183 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 MPOP05164 745 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 POLBP06746 335 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 CD1CP29017 333 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 GPLD1P80108 840 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 RPE65Q16518 533 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 AMZ1Q400G9 498 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 MSS51Q4VC12 460 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 DNAJC21Q5F1R6 531 aaKnown RBP19.52■□□□□ 0.72
COL9A3-202ENST00000452372 ZNF761Q86XN6 746 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-202ENST00000452372 TRIM48Q8IWZ4 208 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 PDIK1LQ8N165 341 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 LILRA3Q8N6C8 439 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-202ENST00000452372 BBOF1Q8ND07 529 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 CXorf40BQ96DE9 158 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 TCF12Q99081 682 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 EBNA1BP2Q99848 306 aaKnown RBP19.52■□□□□ 0.72
COL9A3-202ENST00000452372 NAT9Q9BTE0 207 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 WWP1Q9H0M0 922 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 UCK1Q9HA47 277 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 SLC40A1Q9NP59 571 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 POT1Q9NUX5 634 aa19.52■□□□□ 0.72
COL9A3-202ENST00000452372 CFAP46Q8IYW2 2715 aa19.52■□□□□ 0.71
COL9A3-202ENST00000452372 HELZ2Q9BYK8 2649 aaKnown RBP19.51■□□□□ 0.71
COL9A3-202ENST00000452372 PRMT5O14744 637 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-202ENST00000452372 NDUFS3O75489 264 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 DXOO77932 396 aaKnown RBP19.51■□□□□ 0.71
COL9A3-202ENST00000452372 CPNE6O95741 557 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 PGAM1P18669 254 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 LSSP48449 732 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 EPHA4P54764 986 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 TUBB2AQ13885 445 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 TYSND1Q2T9J0 566 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 CAPRIN2Q6IMN6 1127 aaKnown RBP19.51■□□□□ 0.71
COL9A3-202ENST00000452372 NEPROQ6NW34 567 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 TMEM26Q6ZUK4 368 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 PIM3Q86V86 326 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 RBM12BQ8IXT5 1001 aaKnown RBP19.51■□□□□ 0.71
COL9A3-202ENST00000452372 INSM2Q96T92 566 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-202ENST00000452372 TUBB2BQ9BVA1 445 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 COG4Q9H9E3 785 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 WHRNQ9P202 907 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 ATXN7L1Q9ULK2 861 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-202ENST00000452372 ENTPD2Q9Y5L3 495 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 FAM169AQ9Y6X4 670 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 ATMQ13315 3056 aa19.51■□□□□ 0.71
COL9A3-202ENST00000452372 LILRA5A6NI73 299 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 TMX2-CTNND1H3BSU7 103 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 PFDN6O15212 129 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 RRP8O43159 456 aaKnown RBP19.5■□□□□ 0.71
COL9A3-202ENST00000452372 SLC35G4P0C7Q5 338 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 OGNP20774 298 aaKnown RBP19.5■□□□□ 0.71
COL9A3-202ENST00000452372 RPS3P23396 243 aaKnown RBP eCLIP19.5■□□□□ 0.716e-12■■□□□ 12.7
COL9A3-202ENST00000452372 PDX1P52945 283 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 TLE3Q04726 772 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 RPA4Q13156 261 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 BBS9Q3SYG4 887 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 DUPD1Q68J44 220 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 ZNF449Q6P9G9 518 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 LRRC69Q6ZNQ3 347 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 USP53Q70EK8 1073 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 LRRC6Q86X45 466 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 OTUD6BQ8N6M0 293 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 OR10G6Q8NH81 332 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 KIF18AQ8NI77 898 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 ELMO1Q92556 727 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 PRR11Q96HE9 360 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-202ENST00000452372 CARD6Q9BX69 1037 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 P2RY12Q9H244 342 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 RDH14Q9HBH5 336 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 ASCL3Q9NQ33 180 aa19.5■□□□□ 0.71
COL9A3-202ENST00000452372 PRAMEF33A0A0G2JMD5 474 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 LIN7AO14910 233 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 BANF1O75531 89 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 TTC4O95801 387 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 MTHFD1P11586 935 aaKnown RBP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 ARL4CP56559 192 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 CALCOCO2Q13137 446 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 CBLBQ13191 982 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 THOC5Q13769 683 aaKnown RBP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 HIF1AQ16665 826 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 LONRF1Q17RB8 773 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms