RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 CFAP206Q8IYR0 622 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 SPDYE1Q8NFV5 336 aaPredicted RBP18.94■□□□□ 0.62
USP40-207ENST00000450940 UBXN4Q92575 508 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 SLC41A2Q96JW4 573 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 RMDN2Q96LZ7 410 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 C12orf66Q96MD2 445 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 KIR3DX1Q9H7L2 352 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 ETNK1Q9HBU6 452 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 IMP3Q9NV31 184 aaKnown RBP18.94■□□□□ 0.62
USP40-207ENST00000450940 SLC24A2Q9UI40 661 aa18.94■□□□□ 0.62
USP40-207ENST00000450940 GOLGA6L3A6NEY3 463 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 GSTM1P09488 218 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 SLC35G4P0C7Q5 338 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 FGF5P12034 268 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 SEPHS1P49903 392 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 PPP1CAP62136 330 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 SH3BP2P78314 561 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 GSTM4Q03013 218 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 ABHD18Q0P651 414 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 CDH17Q12864 832 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 SKIDA1Q1XH10 827 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 ZRANB3Q5FWF4 1079 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 IRGCQ6NXR0 463 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 DRICH1Q6PGQ1 229 aaPredicted RBP18.93■□□□□ 0.62
USP40-207ENST00000450940 FAM92BQ6ZTR7 304 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 LRRC8AQ8IWT6 810 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 PIANPQ8IYJ0 282 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 TAB3Q8N5C8 712 aaPredicted RBP18.93■□□□□ 0.62
USP40-207ENST00000450940 LILRA3Q8N6C8 439 aaPredicted RBP18.93■□□□□ 0.62
USP40-207ENST00000450940 EXD3Q8N9H8 876 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 OR52K1Q8NGK4 314 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 C1orf54Q8WWF1 131 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 CD180Q99467 661 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 RIMKLBQ9ULI2 386 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 ZNF148Q9UQR1 794 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 CFAP20Q9Y6A4 193 aaKnown RBP18.93■□□□□ 0.62
USP40-207ENST00000450940 ZNF462Q96JM2 2506 aa18.93■□□□□ 0.62
USP40-207ENST00000450940 OR5K3A6NET4 321 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 RASSF9O75901 435 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 POLBP06746 335 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 CCDC175P0C221 793 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 PRSS56P0CW18 603 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 NDUFS1P28331 727 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 FOXM1Q08050 763 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 SEMA5AQ13591 1074 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 SEPT6Q14141 434 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 CCNG2Q16589 344 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 DBN1Q16643 649 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 DUS1LQ6P1R4 473 aaKnown RBP18.92■□□□□ 0.62
USP40-207ENST00000450940 MICALCLQ6ZW33 695 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 KMT5CQ86Y97 462 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 SLC45A3Q96JT2 553 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 OR6C1Q96RD1 312 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 RANBP9Q96S59 729 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 OR52A5Q9H2C5 316 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 COG4Q9H9E3 785 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 PIH1D1Q9NWS0 290 aaKnown RBP18.92■□□□□ 0.62
USP40-207ENST00000450940 DRG1Q9Y295 367 aaKnown RBP18.92■□□□□ 0.62
USP40-207ENST00000450940 HEBP2Q9Y5Z4 205 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 COLEC10Q9Y6Z7 277 aa18.92■□□□□ 0.62
USP40-207ENST00000450940 IGHV5-51A0A0C4DH38 117 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 LOC101059948A0A1B0GTJ6 334 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 AP2A2O94973 939 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 IFNB1P01574 187 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 CD151P48509 253 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 CYP4F2P78329 520 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 ACVR1Q04771 509 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 RPA4Q13156 261 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 LAMB3Q13751 1172 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 ITIH4Q14624 930 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 PLCL1Q15111 1095 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 TBR1Q16650 682 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.91■□□□□ 0.62
USP40-207ENST00000450940 TAS2R42Q7RTR8 314 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 CARFQ8N187 725 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 CLDN19Q8N6F1 224 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 OR13J1Q8NGT2 312 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 EXTL1Q92935 676 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 ALS2CR12Q96Q35 445 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 EFHD1Q9BUP0 239 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 TLR10Q9BXR5 811 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 VPS37BQ9H9H4 285 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 CASS4Q9NQ75 786 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 HRASLS2Q9NWW9 162 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 ZKSCAN5Q9Y2L8 839 aa18.91■□□□□ 0.62
USP40-207ENST00000450940 HEATR9A2RTY3 570 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 CCDC162PA2VCL2 907 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 TLCD2A6NGC4 264 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 ETS1P14921 441 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 MSNP26038 577 aaKnown RBP18.9■□□□□ 0.62
USP40-207ENST00000450940 FOXN2P32314 431 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 STAT5AP42229 794 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 GRIA1P42261 906 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 NSG1P42857 185 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 CCZ1BP86790 482 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 CCZ1P86791 482 aaPredicted RBP18.9■□□□□ 0.62
USP40-207ENST00000450940 SNX1Q13596 522 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 CYB5D1Q6P9G0 228 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 PACS1Q6VY07 963 aa18.9■□□□□ 0.62
USP40-207ENST00000450940 BPHLQ86WA6 291 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms