RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 DERAQ9Y315 318 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RPL36Q9Y3U8 105 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 PRKAB1Q9Y478 270 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PCDHGB1Q9Y5G3 927 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TNPO3Q9Y5L0 923 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 LAMB1P07942 1786 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DUOX1Q9NRD9 1551 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 C4AP0C0L4 1744 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 C4BP0C0L5 1744 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLIT2O94813 1529 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FRMPD2Q68DX3 1309 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 CAMTA1Q9Y6Y1 1673 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 A0A096LPK6 155 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 E9PAM4 449 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TYROBPO43914 113 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC43A1O75387 559 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CYP7B1O75881 506 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SEC14L2O76054 403 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TDP2O95551 362 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ADAP00813 363 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GH1P01241 217 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DNTTP04053 509 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FCER2P06734 321 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 KCNA5P22460 613 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DNASE1P24855 282 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 IL1R2P27930 398 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PTGER2P43116 358 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MCAMP43121 646 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NR4A2P43354 598 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MEOX2P50222 304 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC7A2P52569 658 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MLLT6P55198 1093 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 HUNKP57058 714 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 WDR4P57081 412 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 RANP62826 216 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 NKX6-1P78426 367 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 HTRA4P83105 476 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 POU4F1Q01851 419 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LIPEQ05469 1076 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PICALMQ13492 652 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PTGES3Q15185 160 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 LEXMQ3ZCV2 418 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SPDYE7PQ495Y7 208 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SBK1Q52WX2 424 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 HGSNATQ68CP4 663 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GTF2IRD2BQ6EKJ0 949 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ALG1LQ6GMV1 187 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF790Q6PG37 636 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SPESP1Q6UW49 350 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LRRN1Q6UXK5 716 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OTOP3Q7RTS5 596 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FBXO33Q7Z6M2 555 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GTF2IRD2Q86UP8 949 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CEP97Q8IW35 865 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CCDC116Q8IYX3 515 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CADM2Q8N3J6 435 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZSCAN1Q8NBB4 408 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OR13F1Q8NGS4 319 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC7A14Q8TBB6 771 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC7A13Q8TCU3 470 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 BCL7CQ8WUZ0 217 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 ING5Q8WYH8 240 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 HDAC10Q969S8 669 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF669Q96BR6 464 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 HSPA12BQ96MM6 686 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 UROC1Q96N76 676 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NLRP3Q96P20 1036 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SCGB3A2Q96PL1 93 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MGME1Q9BQP7 344 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FEM1AQ9BSK4 669 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC19A3Q9BZV2 496 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OR51V1Q9H2C8 321 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MTG2Q9H4K7 406 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ANKEF1Q9NU02 776 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF358Q9NW07 568 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TMEM181Q9P2C4 612 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC17A7Q9P2U7 560 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ACTL7AQ9Y615 435 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 USP54Q70EL1 1684 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MEIOCA2RUB1 952 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ARGFXA6NJG6 315 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CAPN14A8MX76 684 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MID1O15344 667 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SEC14L5O43304 696 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RDH16O75452 317 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LGR5O75473 907 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ARIH2O95376 493 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF682O95780 498 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PAK4O96013 591 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 ADRB1P08588 477 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 IL3P08700 152 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CSF3P09919 207 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LTA4HP09960 611 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 CD1EP15812 388 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RYKP34925 604 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GRIA4P48058 902 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 HNMTP50135 292 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ARPP19P56211 112 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TAS2R43P59537 309 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GHRHRQ02643 423 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms