RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SPRY4Q9C004 299 aa14.93□□□□□ -0.02
CHD3-205ENST00000449744 SEMA4CQ9C0C4 833 aa14.93□□□□□ -0.02
CHD3-205ENST00000449744 VPS37BQ9H9H4 285 aa14.93□□□□□ -0.02
CHD3-205ENST00000449744 GPN2Q9H9Y4 310 aaPredicted RBP14.93□□□□□ -0.02
CHD3-205ENST00000449744 PIH1D1Q9NWS0 290 aaKnown RBP14.93□□□□□ -0.02
CHD3-205ENST00000449744 TMEM184BQ9Y519 407 aaPredicted RBP14.93□□□□□ -0.02
CHD3-205ENST00000449744 COLEC10Q9Y6Z7 277 aa14.93□□□□□ -0.02
CHD3-205ENST00000449744 C17orf113A0A1B0GUU1 675 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 ERI2A8K979 691 aaKnown RBP14.92□□□□□ -0.02
CHD3-205ENST00000449744 ZNF891A8MT65 544 aaPredicted RBP14.92□□□□□ -0.02
CHD3-205ENST00000449744 SGTAO43765 313 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 LIASO43766 372 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 ACRV1P26436 265 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 NDUFS1P28331 727 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 FDFT1P37268 417 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 ARL4DP49703 201 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 CACNG1Q06432 222 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 ABHD18Q0P651 414 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 CDH17Q12864 832 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 IL11RAQ14626 422 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 SKIDA1Q1XH10 827 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 LINC00303Q3SY05 128 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 DUS1LQ6P1R4 473 aaKnown RBP14.92□□□□□ -0.02
CHD3-205ENST00000449744 PPP1R21Q6ZMI0 780 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 TIPARPQ7Z3E1 657 aaKnown RBP14.92□□□□□ -0.02
CHD3-205ENST00000449744 OOSP2Q86WS3 158 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 ESX1Q8N693 406 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 SIDT2Q8NBJ9 832 aaKnown RBP14.92□□□□□ -0.02
CHD3-205ENST00000449744 SPDYE1Q8NFV5 336 aaPredicted RBP14.92□□□□□ -0.02
CHD3-205ENST00000449744 C1orf54Q8WWF1 131 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 KLHL6Q8WZ60 621 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 CDKN2AIPNLQ96HQ2 116 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 ELMO2Q96JJ3 720 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 SLC12A9Q9BXP2 914 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 ETNK1Q9HBU6 452 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 HRASLS2Q9NWW9 162 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 HEBP2Q9Y5Z4 205 aa14.92□□□□□ -0.02
CHD3-205ENST00000449744 HELZ2Q9BYK8 2649 aaKnown RBP14.92□□□□□ -0.02
CHD3-205ENST00000449744 TRBV5-4A0A0C4DH59 114 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 LOC101059948A0A1B0GTJ6 334 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 UBA6A0AVT1 1052 aaPredicted RBP14.91□□□□□ -0.02
CHD3-205ENST00000449744 CCDC78A2IDD5 438 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 OR5K3A6NET4 321 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 IFRD1O00458 451 aaPredicted RBP14.91□□□□□ -0.02
CHD3-205ENST00000449744 DLGAP3O95886 979 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 CCDC175P0C221 793 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 NELFEP18615 380 aaKnown RBP14.91□□□□□ -0.02
CHD3-205ENST00000449744 CDKN1CP49918 316 aaPredicted RBP14.91□□□□□ -0.02
CHD3-205ENST00000449744 PPP1CAP62136 330 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 SNX1Q13596 522 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 LAMB3Q13751 1172 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 MAP7Q14244 749 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 OASLQ15646 514 aaKnown RBP14.91□□□□□ -0.02
CHD3-205ENST00000449744 TBR1Q16650 682 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 DNTTIP2Q5QJE6 756 aaKnown RBP14.91□□□□□ -0.02
CHD3-205ENST00000449744 CCDC89Q8N998 374 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 OR52K1Q8NGK4 314 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 RMDN2Q96LZ7 410 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 CD180Q99467 661 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 KIR3DX1Q9H7L2 352 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 PDE7BQ9NP56 450 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 LZTFL1Q9NQ48 299 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 SLC24A2Q9UI40 661 aa14.91□□□□□ -0.02
CHD3-205ENST00000449744 FLNBO75369 2602 aaKnown RBP14.9□□□□□ -0.02
CHD3-205ENST00000449744 IGLV3-16A0A075B6K0 115 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 IGHV5-51A0A0C4DH38 117 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 OR6C74A6NCV1 312 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 PRSS56P0CW18 603 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 SFTPCP11686 197 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 FGF5P12034 268 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 PLA2G2AP14555 144 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 MSNP26038 577 aaKnown RBP14.9□□□□□ -0.02
CHD3-205ENST00000449744 ACY1Q03154 408 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 PRKAA1Q13131 559 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 CCDC38Q502W7 563 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 MEI1Q5TIA1 1274 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 CAPRIN2Q6IMN6 1127 aaKnown RBP14.9□□□□□ -0.02
CHD3-205ENST00000449744 C6orf15Q6UXA7 325 aaPredicted RBP14.9□□□□□ -0.02
CHD3-205ENST00000449744 PPP1R3BQ86XI6 285 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 KMT5CQ86Y97 462 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 UNC5BQ8IZJ1 945 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 LILRA3Q8N6C8 439 aaPredicted RBP14.9□□□□□ -0.02
CHD3-205ENST00000449744 EXD3Q8N9H8 876 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.9□□□□□ -0.02
CHD3-205ENST00000449744 STAMBPL1Q96FJ0 436 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 SLC45A3Q96JT2 553 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 FERD3LQ96RJ6 166 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 MAP3K3Q99759 626 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 COG4Q9H9E3 785 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 RAB6BQ9NRW1 208 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 SMARCAL1Q9NZC9 954 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 RARRES3Q9UL19 164 aa14.9□□□□□ -0.02
CHD3-205ENST00000449744 HEATR9A2RTY3 570 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 TLCD2A6NGC4 264 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 B8ZZF3 427 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 QSOX1O00391 747 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 NRDCO43847 1150 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 KIAA0754O94854 1291 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 AP2A2O94973 939 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 GSTM1P09488 218 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms