RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 TMEM259Q4ZIN3 620 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 ARL13AQ5H913 290 aaPredicted RBP9.51□□□□□ -0.89
RFC4-210ENST00000449502 ZNF678Q5SXM1 525 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 SULT1C3Q6IMI6 304 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 TTC23LQ6PF05 361 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 AMZ2Q86W34 360 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 TCAIMQ8N3R3 496 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 TP53I13Q8NBR0 393 aaPredicted RBP9.51□□□□□ -0.89
RFC4-210ENST00000449502 DENND6BQ8NEG7 585 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 CFAP61Q8NHU2 1237 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 HM13Q8TCT9 377 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 GLMNQ92990 594 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 ATP6V1E2Q96A05 226 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 L3HYPDHQ96EM0 354 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 COX14Q96I36 57 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 TMEM237Q96Q45 408 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 HHIPQ96QV1 700 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 TEX101Q9BY14 249 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 FOXQ1Q9C009 403 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 ZNF395Q9H8N7 513 aaPredicted RBP9.51□□□□□ -0.89
RFC4-210ENST00000449502 RMI1Q9H9A7 625 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 CD248Q9HCU0 757 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 MBNL1Q9NR56 388 aaKnown RBP9.51□□□□□ -0.89
RFC4-210ENST00000449502 ARL15Q9NXU5 204 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 KCNK4Q9NYG8 393 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 VTI1BQ9UEU0 232 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 ZNHIT2Q9UHR6 403 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 CYP8B1Q9UNU6 501 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 APOBEC2Q9Y235 224 aaKnown RBP9.51□□□□□ -0.89
RFC4-210ENST00000449502 STK38LQ9Y2H1 464 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.51□□□□□ -0.89
RFC4-210ENST00000449502 RAP2CQ9Y3L5 183 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 OR1A2Q9Y585 309 aa9.51□□□□□ -0.89
RFC4-210ENST00000449502 DNMT3AQ9Y6K1 912 aaPredicted RBP9.51□□□□□ -0.89
RFC4-210ENST00000449502 KLHL33A6NCF5 533 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 IFRD1O00458 451 aaPredicted RBP9.5□□□□□ -0.89
RFC4-210ENST00000449502 FSBPO95073 299 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 CD6P30203 668 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 ACSL1P33121 698 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 NUDT1P36639 197 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 KCNC1P48547 511 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 RPIAP49247 311 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 RPL14P50914 215 aaKnown RBP9.5□□□□□ -0.89
RFC4-210ENST00000449502 AQP5P55064 265 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 PPP2CBP62714 309 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 PPP2CAP67775 309 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 IFT88Q13099 833 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 FGL2Q14314 439 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 RBBP7Q16576 425 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 PLA2G4EQ3MJ16 856 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 CDKL4Q5MAI5 379 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 KIAA0895LQ68EN5 471 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 CYHR1Q6ZMK1 362 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 CCDC121Q6ZUS5 278 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 GALNT13Q8IUC8 556 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 SPNS2Q8IVW8 549 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 PELI3Q8N2H9 469 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 OR56A4Q8NGH8 313 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 OR2L2Q8NH16 312 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 RFWD2Q8NHY2 731 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 AGR3Q8TD06 166 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 MAGEC3Q8TD91 643 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 CCT6BQ92526 530 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 SNX19Q92543 992 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 FOXJ1Q92949 421 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 TOE1Q96GM8 510 aaKnown RBP9.5□□□□□ -0.89
RFC4-210ENST00000449502 SPACA7Q96KW9 195 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 LINC00615Q96LM1 132 aaPredicted RBP9.5□□□□□ -0.89
RFC4-210ENST00000449502 APOOQ9BUR5 198 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 SLC12A9Q9BXP2 914 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 SHCBP1LQ9BZQ2 653 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 COG4Q9H9E3 785 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 RDH14Q9HBH5 336 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 PARVBQ9HBI1 364 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 FZD3Q9NPG1 666 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 PFDN4Q9NQP4 134 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 PNPOQ9NVS9 261 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 USP36Q9P275 1121 aaKnown RBP9.5□□□□□ -0.89
RFC4-210ENST00000449502 IKZF3Q9UKT9 509 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 SIT1Q9Y3P8 196 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 GPSM3Q9Y4H4 160 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 COL4A3Q01955 1670 aa9.5□□□□□ -0.89
RFC4-210ENST00000449502 KIF26AQ9ULI4 1882 aaPredicted RBP9.49□□□□□ -0.89
RFC4-210ENST00000449502 LAMA2P24043 3122 aaKnown RBP9.49□□□□□ -0.89
RFC4-210ENST00000449502 SLC5A10A0PJK1 596 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 TRPC5OSA6NMA1 111 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 PRAMEF26H0Y7S4 382 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 TOR1BO14657 336 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 SGTAO43765 313 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 KLK8O60259 260 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 CCNT2O60583 730 aaKnown RBP9.49□□□□□ -0.89
RFC4-210ENST00000449502 DIAPH2O60879 1101 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 KCNJ13O60928 360 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 GPC4O75487 556 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 SLCO2B1O94956 709 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 CHEK2O96017 543 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 RPN2P04844 631 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 CHRNGP07510 517 aa9.49□□□□□ -0.89
RFC4-210ENST00000449502 C7P10643 843 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms