RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PTK2BQ14289 1009 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 PCBP2Q15366 365 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 MUM1Q2TAK8 710 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 HABP4Q5JVS0 413 aaKnown RBP9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 ERAP2Q6P179 960 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 IL27RAQ6UWB1 636 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 SERPINA13PQ6UXR4 307 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 MILR1Q7Z6M3 343 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 OR4F6Q8NGB9 312 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF382Q96SR6 550 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 C1orf50Q9BV19 199 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 NKX2-4Q9H2Z4 354 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 IL1RL2Q9HB29 575 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 S100A14Q9HCY8 104 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 ARL15Q9NXU5 204 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 PTBP2Q9UKA9 531 aaKnown RBP9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 ANGPTL2Q9UKU9 493 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 NOTCH4Q99466 2003 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 CHD9Q3L8U1 2897 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 ANKRD33BA6NCL7 494 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 TBC1D3BA6NDS4 549 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 PLK4O00444 970 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 OR7A17O14581 309 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 MRASO14807 208 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 INPP4BO15327 924 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 NRP2O60462 931 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 FKBP6O75344 327 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 VPS4BO75351 444 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 SMNDC1O75940 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 VHLP40337 213 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 PIK3CGP48736 1102 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 RPIAP49247 311 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 PSME3P61289 254 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 CRY1Q16526 586 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF423Q2M1K9 1284 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF284Q2VY69 593 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 VPS26BQ4G0F5 336 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 PIGGQ5H8A4 983 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 PPP2R2DQ66LE6 453 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 SULT1C3Q6IMI6 304 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 UBE2R2Q712K3 238 aaPredicted RBP9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 EFL1Q7Z2Z2 1120 aaKnown RBP9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 PHYKPLQ8IUZ5 450 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 VRK3Q8IV63 474 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 FUNDC1Q8IVP5 155 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 PDPRQ8NCN5 879 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 OR2T11Q8NH01 316 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 WFIKKN2Q8TEU8 576 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 SLC25A23Q9BV35 468 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 CD244Q9BZW8 370 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 CACNA2D2Q9NY47 1150 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 OPTCQ9UBM4 332 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 COQ6Q9Y2Z9 468 aa9.36□□□□□ -0.91
COL6A4P1-201ENST00000446690 HELZP42694 1942 aaKnown RBP9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 FADS2P1A8MWK0 482 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 CFAP99D6REC4 459 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 E7ENX8 843 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 FFAR3O14843 346 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 NVLO15381 856 aaKnown RBP9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 GPR42O15529 346 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 OTCP00480 354 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 POU2F2P09086 479 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 CBSLP0DN79 551 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 XRCC1P18887 633 aaPredicted RBP9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 AOAHP28039 575 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 HMOX2P30519 316 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 CBSP35520 551 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 ATP4BP51164 291 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 CEACAM7Q14002 265 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 SGO1Q5FBB7 561 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 TANGO2Q6ICL3 276 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 FBXL19Q6PCT2 694 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 PARS2Q7L3T8 475 aaKnown RBP9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 FNDC5Q8NAU1 212 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 PPFIBP2Q8ND30 876 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 ELMO1Q92556 727 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 RHBDF1Q96CC6 855 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 LRIG1Q96JA1 1093 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 SH3GL3Q99963 347 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 SLC39A3Q9BRY0 314 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 NUSAP1Q9BXS6 441 aaKnown RBP9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 PBX4Q9BYU1 374 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 PFDN4Q9NQP4 134 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 THG1LQ9NWX6 298 aaKnown RBP9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 SLC27A6Q9Y2P4 619 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 PCDHGA7Q9Y5G6 932 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 ALPK3Q96L96 1907 aa9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 PRRC2BQ5JSZ5 2229 aaKnown RBP9.35□□□□□ -0.91
COL6A4P1-201ENST00000446690 IGLV3-16A0A075B6K0 115 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 PABPN1LA6NDY0 278 aaKnown RBP9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ANTXRLA6NF34 631 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 SYNCRIPO60506 623 aaKnown RBP9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ANXA5P08758 320 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 HIST1H2AGP0C0S8 130 aaPredicted RBP9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 IDO1P14902 403 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 HIST1H2ADP20671 130 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ME2P23368 584 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 PEX19P40855 299 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 MAGEA10P43363 369 aaPredicted RBP9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 HTR6P50406 440 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms