RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FADS2P1A8MWK0 482 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 E2F3O00716 465 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 C1QTNF8P60827 252 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 VBP1P61758 197 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 CTBP1Q13363 440 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 SERINC3Q13530 473 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 HMGB4Q8WW32 186 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 TRIM63Q969Q1 353 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 SLC47A1Q96FL8 570 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 RSPH9Q9H1X1 276 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 NPEPPSL1A6NEC2 478 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 LAMTOR5O43504 91 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 EPOP01588 193 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 PROCP04070 461 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 CD247P20963 164 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 IZUMO2Q6UXV1 221 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 COX18Q8N8Q8 333 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 MAGEE2Q8TD90 523 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 S100ZQ8WXG8 99 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 ARHGAP9Q9BRR9 750 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 ELL3Q9HB65 397 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-204ENST00000446349 GOLGA2P5Q9HBQ8 144 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 MS4A12Q9NXJ0 267 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 COG5Q9UP83 839 aa8.44□□□□□ -1.06
PTPN3-204ENST00000446349 MYBPHLA2RUH7 354 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 MFSD11O43934 449 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 NRP2O60462 931 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 CHRNGP07510 517 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 ANXA4P09525 319 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 TCF4P15884 667 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF57Q68EA5 555 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 MAMDC4Q6UXC1 1216 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 P4HA3Q7Z4N8 544 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 C12orf40Q86WS4 652 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 NUDT13Q86X67 352 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 PJA1Q8NG27 643 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 FBXO30Q8TB52 745 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 PHOSPHO2Q8TCD6 241 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 RBM4BQ9BQ04 359 aaKnown RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 MCMBPQ9BTE3 642 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 RBM4Q9BWF3 364 aaKnown RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 LRMDAQ9H2I8 198 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 KLHL31Q9H511 634 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 DNAJC28Q9NX36 388 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 MRPL39Q9NYK5 338 aaKnown RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF624Q9P2J8 865 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 CCDC162PA2VCL2 907 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 LILRB3O75022 631 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 HBQ1P09105 142 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 TMED10P49755 219 aaKnown RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 POLR2JP52435 117 aaKnown RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 SELENOVP59797 346 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 USP46P62068 366 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 FOXM1Q08050 763 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 PPIDQ08752 370 aaKnown RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 IL17AQ16552 155 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 ACOT12Q8WYK0 555 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 SMPDL3AQ92484 453 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 MYOCQ99972 504 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 BCL2L14Q9BZR8 327 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 DSN1Q9H410 356 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 TAS2R14Q9NYV8 317 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 MARK1Q9P0L2 795 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 CRYBG1Q9Y4K1 1723 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 PGRMC2O15173 223 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 TSPAN6O43657 245 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 CPN2P22792 545 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 SLC26A3P40879 764 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 RING1Q06587 406 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 HKDC1Q2TB90 917 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 FAM91A1Q658Y4 838 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 NAIF1Q69YI7 327 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 ENPP7Q6UWV6 458 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 MAPK15Q8TD08 544 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 NEK7Q8TDX7 302 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 CMTM7Q96FZ5 175 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 KLHDC7BQ96G42 594 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 SDCBP2Q9H190 292 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 C14orf105Q9NVL8 296 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 RNF186Q9NXI6 227 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 NWD2Q9ULI1 1742 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 A0A1W2PQ72 361 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 STX16-NPEPL1H3BU86 382 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 K7EPI3 171 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 STX16O14662 325 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 PDPK1O15530 556 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 MT-CO1P00395 513 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 SERPINA3P01011 423 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 IDH2P48735 452 aaKnown RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 ATP12AP54707 1039 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 JAM2P57087 298 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 SLC9B1Q4ZJI4 515 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 TMC5Q6UXY8 1006 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 YTHDF3Q7Z739 585 aaKnown RBP8.43□□□□□ -1.06
PTPN3-204ENST00000446349 SFRP1Q8N474 314 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 FAM174AQ8TBP5 190 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 POF1BQ8WVV4 589 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 SP140LQ9H930 580 aa8.43□□□□□ -1.06
PTPN3-204ENST00000446349 DMAC2Q9NW81 257 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms