RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 RUVBL2Q9Y230 463 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 PCDHGA9Q9Y5G4 932 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 ALG6Q9Y672 507 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 KDM3AQ9Y4C1 1321 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 C4AP0C0L4 1744 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 A0A0X1KG70 313 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 LOC110117498-PIK3R3F6TDL0 507 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CTDSP2O14595 271 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZBTB39O15060 712 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TO15178 435 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZBTB14O43829 449 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 BCAS1O75363 584 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 GCATO75600 419 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PPM1BO75688 479 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CRTAPO75718 401 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 LDOC1O95751 146 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 DHFRP00374 187 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 POMCP01189 267 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 IFNA7P01567 189 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 APOC3P02656 99 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CFIP05156 583 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 RBP1P09455 135 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 COX4I1P13073 169 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GJA1P17302 382 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GLDCP23378 1020 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 S100PP25815 95 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 HNF4AP41235 474 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLC15A1P46059 708 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ARCN1P48444 511 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 HK3P52790 923 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 LIMK1P53667 647 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CASP6P55212 293 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TFAMQ00059 246 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 FKBP3Q00688 224 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 SP2Q02086 613 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 YWHAHQ04917 246 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 SRSF5Q13243 272 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 KCNJ11Q14654 390 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 STARD3Q14849 445 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZNF169Q14929 603 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 TEAD4Q15561 434 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ALX1Q15699 326 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MAPKAPK3Q16644 382 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 YIF1BQ5BJH7 314 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CDKL4Q5MAI5 379 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MROH9Q5TGP6 573 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 STEAP3Q658P3 488 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SEL1L3Q68CR1 1132 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TIGD7Q6NT04 549 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 ARMC6Q6NXE6 501 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TMEM65Q6PI78 240 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 USP17L6PQ6QN14 398 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 KCNT2Q6UVM3 1135 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CATSPERGQ6ZRH7 1159 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZCCHC23Q6ZST2 131 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 Q6ZVU0 165 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZNF571Q7Z3V5 609 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 CBR4Q8N4T8 237 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 DPP10Q8N608 796 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 AMER2Q8N7J2 671 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ANKFN1Q8N957 763 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 LRRC57Q8N9N7 239 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SRFBP1Q8NEF9 429 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 OR10T2Q8NGX3 314 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ATG4AQ8WYN0 398 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 UFD1Q92890 307 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GJA10Q969M2 543 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MAGEB10Q96LZ2 347 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLC9A7Q96T83 725 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PAFAH2Q99487 392 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 OSMRQ99650 979 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TCF25Q9BQ70 676 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SORBS1Q9BX66 1292 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 GPR63Q9BZJ6 419 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZNF518BQ9C0D4 1074 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 QRSL1Q9H0R6 528 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 PPIL3Q9H2H8 161 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 ABHD16BQ9H3Z7 469 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ATP13A1Q9HD20 1204 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MRPL47Q9HD33 250 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLAMF7Q9NQ25 335 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PAK6Q9NQU5 681 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 CACNA2D2Q9NY47 1150 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TRPM5Q9NZQ8 1165 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MPP6Q9NZW5 540 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 KANSL3Q9P2N6 904 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MORF4L1Q9UBU8 362 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GTF2IRD1Q9UHL9 959 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GLS2Q9UI32 602 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PRPF19Q9UMS4 504 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 RGPD2P0DJD1 1756 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 C7orf72A4D263 438 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 RGSL1A5PLK6 1076 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLC9B1P1A6NJY1 282 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SGK1O00141 431 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 NEMP1O14524 444 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GSTA4O15217 222 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TREHO43280 583 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MED24O75448 989 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TIPRLO75663 272 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms