RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SARS2Q9NP81 518 aaKnown RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 SMOXQ9NWM0 555 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 STOML1Q9UBI4 398 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 MUC22E2RYF6 1773 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 G3V2L1 256 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 FBP2O00757 339 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 MID1O15344 667 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 LZTS3O60299 673 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 KLF8O95600 359 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 SERPINE1P05121 402 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 RALBP11234 206 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 HOXB2P14652 356 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TFEBP19484 476 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 GRK2P25098 689 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 ARFIP2P53365 341 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 MRPS21P82921 87 aaKnown RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TDGQ13569 410 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 FBXO43Q4G163 708 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TMEM52BQ4KMG9 183 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 GPRC6AQ5T6X5 926 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 HENMT1Q5T8I9 393 aaKnown RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 ZYG11AQ6WRX3 759 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 CYP2U1Q7Z449 544 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TMEM151AQ8N4L1 468 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 NKAPQ8N5F7 415 aaKnown RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TXNDC5Q8NBS9 432 aaKnown RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 SKA1Q96BD8 255 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 DTD2Q96FN9 168 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 MPP4Q96JB8 637 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 COQ10AQ96MF6 247 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 ABCG8Q9H221 673 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 PARVBQ9HBI1 364 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 F5P12259 2224 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TARM1B6A8C7 271 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 CFAP99D6REC4 459 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 MAGEB3O15480 346 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 NARSO43776 548 aaKnown RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TRIM13O60858 407 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 RECQL5O94762 991 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 UNC5CO95185 931 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 SRFP11831 508 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 C6P13671 934 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 AKT1P31749 480 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 S100A5P33763 92 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 DRD3P35462 400 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 SETMARQ53H47 684 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 TECRLQ5HYJ1 363 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 PIP5KL1Q5T9C9 394 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 KLHL35Q6PF15 583 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 MACC1Q6ZN28 852 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 ZCCHC23Q6ZST2 131 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 OTOAQ7RTW8 1153 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 GRAMD2AQ8IUY3 354 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 CROCCP3Q8IVE0 287 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 SPNS2Q8IVW8 549 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 DEFB123Q8N688 67 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 SPERTQ8NA61 448 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 CXorf40AQ8TE69 158 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 DCUN1D1Q96GG9 259 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 VPS50Q96JG6 964 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 MAELQ96JY0 434 aaKnown RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 EGLN2Q96KS0 407 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 GUCD1Q96NT3 240 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 DHRS7Q9Y394 339 aa7.97□□□□□ -1.13
CCDC39-201ENST00000442201 MTF2Q9Y483 593 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-201ENST00000442201 BPTFQ12830 3046 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 IGLV3-16A0A075B6K0 115 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 IQCF5A8MTL0 148 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 MMP20O60882 483 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 EIF2S1P05198 315 aaKnown RBP7.96□□□□□ -1.13
CCDC39-201ENST00000442201 SBK3P0C264 359 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 FGF3P11487 239 aaPredicted RBP7.96□□□□□ -1.13
CCDC39-201ENST00000442201 PRKAA2P54646 552 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 IL2P60568 153 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 ATP6V0D1P61421 351 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 ASPHQ12797 758 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 IER5LQ5T953 404 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 KIAA1211LQ6NV74 962 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 KIF2BQ8N4N8 673 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 HDDC3Q8N4P3 179 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 AADATQ8N5Z0 425 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 SIDT2Q8NBJ9 832 aaKnown RBP7.96□□□□□ -1.13
CCDC39-201ENST00000442201 CD200R1Q8TD46 325 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 FAM3CQ92520 227 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 INPP5DQ92835 1189 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 SGF29Q96ES7 293 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 DERL2Q9GZP9 239 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 ALG9Q9H6U8 611 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 SLC2A4RGQ9NR83 387 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 THAP1Q9NVV9 213 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 OXSMQ9NWU1 459 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 GALPQ9UBC7 116 aa7.96□□□□□ -1.13
CCDC39-201ENST00000442201 GPC6Q9Y625 555 aaPredicted RBP7.96□□□□□ -1.13
CCDC39-201ENST00000442201 FAM47E-STBD1D6RA91 191 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 TSPAN6O43657 245 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 AP1G1O43747 822 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 ZBTB14O43829 449 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 ADAM23O75077 832 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 H2AFYO75367 372 aaKnown RBP7.96□□□□□ -1.14
CCDC39-201ENST00000442201 RNASEH2AO75792 299 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms