RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZDHHC12Q96GR4 267 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 C12orf66Q96MD2 445 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 SLC12A9Q9BXP2 914 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 IMP3Q9NV31 184 aaKnown RBP18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 ZNF148Q9UQR1 794 aa18.48■□□□□ 0.55
HMGB3P22-201ENST00000442010 CFAP99D6REC4 459 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 POLR1CO15160 346 aaPredicted RBP18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 IFNB1P01574 187 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 LIFP15018 202 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 GRIA1P42261 906 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 SH3BP2P78314 561 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 CACNG1Q06432 222 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 CDH17Q12864 832 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 SEMA5AQ13591 1074 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 SNX1Q13596 522 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 SEPT6Q14141 434 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 LY6DQ14210 128 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 CCNG2Q16589 344 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 DBN1Q16643 649 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 CACHD1Q5VU97 1274 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 DRICH1Q6PGQ1 229 aaPredicted RBP18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 FAM92BQ6ZTR7 304 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 IL22RA1Q8N6P7 574 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 OR13J1Q8NGT2 312 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 TLR10Q9BXR5 811 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 KIR3DX1Q9H7L2 352 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 FAM8A1Q9UBU6 413 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 SLC24A2Q9UI40 661 aa18.47■□□□□ 0.55
HMGB3P22-201ENST00000442010 SNRNP200O75643 2136 aaKnown RBP18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 OR5K3A6NET4 321 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 STK17BO94768 372 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 ITGB2P05107 769 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 POLBP06746 335 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 SLC35G4P0C7Q5 338 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 FOXN2P32314 431 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 C19orf57Q0VDD7 668 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 CCDC38Q502W7 563 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 IRGCQ6NXR0 463 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 NLGN4XQ8N0W4 816 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 NLGN4YQ8NFZ3 816 aaPredicted RBP18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 SLC41A2Q96JW4 573 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 ALS2CR12Q96Q35 445 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 RANBP9Q96S59 729 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 CCM2Q9BSQ5 444 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 OR52A5Q9H2C5 316 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 COG4Q9H9E3 785 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 CASS4Q9NQ75 786 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 RIMKLBQ9ULI2 386 aa18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 DRG1Q9Y295 367 aaKnown RBP18.46■□□□□ 0.55
HMGB3P22-201ENST00000442010 IGHV5-51A0A0C4DH38 117 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 CCDC78A2IDD5 438 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 OR51F1A6NGY5 319 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 RASSF9O75901 435 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 NELFEP18615 380 aaKnown RBP18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 MAP4P27816 1152 aaKnown RBP18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 CYP4F2P78329 520 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 ACVR1Q04771 509 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 FOXM1Q08050 763 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 MAP7Q14244 749 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 IL11RAQ14626 422 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 PLCL1Q15111 1095 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 SKIDA1Q1XH10 827 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 KLHL35Q6PF15 583 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 TAS2R42Q7RTR8 314 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 CLDN19Q8N6F1 224 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 EXD3Q8N9H8 876 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 ZSCAN1Q8NBB4 408 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 RAB6BQ9NRW1 208 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 PRSS21Q9Y6M0 314 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 SEC16AO15027 2179 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 HELZ2Q9BYK8 2649 aaKnown RBP18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 ZNF462Q96JM2 2506 aa18.45■□□□□ 0.54
HMGB3P22-201ENST00000442010 LOC101059948A0A1B0GTJ6 334 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 HEATR9A2RTY3 570 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 CCDC162PA2VCL2 907 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 GOLGA6L3A6NEY3 463 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 AP2A2O94973 939 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 ZSCAN5DPP0CG00 497 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 FGF5P12034 268 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 ZNF28P17035 718 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 MSNP26038 577 aaKnown RBP18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 RPL22P35268 128 aaKnown RBP18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 ITIH4Q14624 930 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 PACS1Q6VY07 963 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 DNAAF3Q8N9W5 541 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 TRIM58Q8NG06 486 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 UBXN4Q92575 508 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 EXTL1Q92935 676 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 MED8Q96G25 268 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 ZNF778Q96MU6 729 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 OR6C1Q96RD1 312 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 MAP3K3Q99759 626 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 PAK5Q9P286 719 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 SLC2A6Q9UGQ3 507 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 ZKSCAN5Q9Y2L8 839 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 COLEC10Q9Y6Z7 277 aa18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 TLN1Q9Y490 2541 aaKnown RBP18.44■□□□□ 0.54
HMGB3P22-201ENST00000442010 FGGP02679 453 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 GSTM1P09488 218 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 ADRA1DP25100 572 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms