RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 B3GALT1Q9Y5Z6 326 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 PRSS21Q9Y6M0 314 aa13.43□□□□□ -0.26
LTBR-202ENST00000440421 C17orf113A0A1B0GUU1 675 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 PGRMC1O00264 195 aaKnown RBP13.42□□□□□ -0.26
LTBR-202ENST00000440421 ZNF185O15231 689 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 KIF1CO43896 1103 aaKnown RBP13.42□□□□□ -0.26
LTBR-202ENST00000440421 RASSF9O75901 435 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 LIPCP11150 499 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 MGAT1P26572 445 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 PDHA2P29803 388 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 COILP38432 576 aaPredicted RBP13.42□□□□□ -0.26
LTBR-202ENST00000440421 NSG1P42857 185 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 PREPP48147 710 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 SEPHS1P49903 392 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 UCNP55089 124 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 PPP1CAP62136 330 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 ACVR1Q04771 509 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 SRSF6Q13247 344 aaKnown RBP13.42□□□□□ -0.26
LTBR-202ENST00000440421 KRT33BQ14525 404 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 ARHGAP40Q5TG30 622 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 CAPRIN2Q6IMN6 1127 aaKnown RBP13.42□□□□□ -0.26
LTBR-202ENST00000440421 NLRP9Q7RTR0 991 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 GPR155Q7Z3F1 870 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 BMPERQ8N8U9 685 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 OR4L1Q8NH43 312 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 PDLIM2Q96JY6 352 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 NAP1L3Q99457 506 aaPredicted RBP13.42□□□□□ -0.26
LTBR-202ENST00000440421 BFARQ9NZS9 450 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 ACSL6Q9UKU0 697 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 RIMKLBQ9ULI2 386 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 CHD6Q8TD26 2715 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 ITPR1Q14643 2758 aa13.42□□□□□ -0.26
LTBR-202ENST00000440421 B4E171 279 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 OR1I1O60431 355 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 AP2A2O94973 939 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 TPSB2P20231 275 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 NMBRP28336 390 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 TSPAN7P41732 249 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 NPY2RP49146 381 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 SEMA3AQ14563 771 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 ITIH4Q14624 930 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 BRD3Q15059 726 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 TPSAB1Q15661 275 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 ZNF658BQ4V348 819 aaPredicted RBP13.41□□□□□ -0.26
LTBR-202ENST00000440421 FASTKD1Q53R41 847 aaKnown RBP13.41□□□□□ -0.26
LTBR-202ENST00000440421 DCAF12Q5T6F0 453 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 CACHD1Q5VU97 1274 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 LYPLAL1Q5VWZ2 237 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 ZNF449Q6P9G9 518 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 KLHL35Q6PF15 583 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 CCDC137Q6PK04 289 aaKnown RBP13.41□□□□□ -0.26
LTBR-202ENST00000440421 PACS1Q6VY07 963 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 NAPRTQ6XQN6 538 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 ZNF534Q76KX8 674 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 LDB1Q86U70 411 aaPredicted RBP13.41□□□□□ -0.26
LTBR-202ENST00000440421 VASH2Q86V25 355 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 RNF31Q96EP0 1072 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 ZDHHC12Q96GR4 267 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 FERD3LQ96RJ6 166 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 TTC1Q99614 292 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 DDA1Q9BW61 102 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 IL22Q9GZX6 179 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 APMAPQ9HDC9 416 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 SYBUQ9NX95 663 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 SLC24A2Q9UI40 661 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 SNX12Q9UMY4 172 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 PCDHB11Q9Y5F2 797 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 PCDHGA3Q9Y5H0 932 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 COLEC10Q9Y6Z7 277 aa13.41□□□□□ -0.26
LTBR-202ENST00000440421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.4□□□□□ -0.26
LTBR-202ENST00000440421 OR6C74A6NCV1 312 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 AP3B1O00203 1094 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 IFRD1O00458 451 aaPredicted RBP13.4□□□□□ -0.26
LTBR-202ENST00000440421 PHF2O75151 1096 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 AVILO75366 819 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 FTH1P02794 183 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 ANKRD34CP0C6C1 535 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 OR56A5P0C7T3 313 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 ITGB6P18564 788 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 CD82P27701 267 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 ARCN1P48444 511 aaKnown RBP13.4□□□□□ -0.26
LTBR-202ENST00000440421 RAB15P59190 212 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 MC2RQ01718 297 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 FOXM1Q08050 763 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 VAC14Q08AM6 782 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 BOP1Q14137 746 aaKnown RBP13.4□□□□□ -0.26
LTBR-202ENST00000440421 KCNJ11Q14654 390 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 CYP1B1Q16678 543 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 ANKRD22Q5VYY1 191 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 LRRC8BQ6P9F7 803 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 CES3Q6UWW8 571 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 CCDC81Q6ZN84 652 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 PHC3Q8NDX5 983 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 ELMO1Q92556 727 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 PEX13Q92968 403 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 CCNL2Q96S94 520 aaPredicted RBP13.4□□□□□ -0.26
LTBR-202ENST00000440421 ASPSCR1Q9BZE9 553 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 B3GNT4Q9C0J1 378 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 OR52A5Q9H2C5 316 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms