RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	SPATA22	Q8NHS9	363 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ARRDC2	Q8TBH0	407 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CXorf40A	Q8TE69	158 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GAB3	Q8WWW8	586 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SDCCAG3	Q96C92	435 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	RTP4	Q96DX8	246 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MISP3	Q96FF7	219 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FEM1C	Q96JP0	617 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HRASLS5	Q96KN8	279 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	KRT12	Q99456	494 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MLPH	Q9BV36	600 aa	Predicted RBP	6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FICD	Q9BVA6	458 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TDRD1	Q9BXT4	1180 aa	Known RBP	6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HDAC8	Q9BY41	377 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	LRRC40	Q9H9A6	602 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PREB	Q9HCU5	417 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SIRT5	Q9NXA8	310 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SARDH	Q9UL12	918 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	RAB23	Q9ULC3	237 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	RPL26L1	Q9UNX3	145 aa	Known RBP	6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SATB2	Q9UPW6	733 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PLAA	Q9Y263	795 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	INVS	Q9Y283	1065 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CHD5	Q8TDI0	1954 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SHROOM3	Q8TF72	1996 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ATG2B	Q96BY7	2078 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	F5	P12259	2224 aa		6.14	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SZT2	Q5T011	3432 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MUC22	E2RYF6	1773 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	IGHV1OR15-9	A0A0B4J2B8	117 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TSPAN11	A1L157	253 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MEI4	A8MW99	385 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638		H0Y858	1186 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PLK4	O00444	970 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HTRA2	O43464	458 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PLRG1	O43660	514 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	AP1G1	O43747	822 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FSBP	O95073	299 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	METTL18	O95568	372 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SEMA4F	O95754	770 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	NPPA	P01160	153 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	EPO	P01588	193 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PRKCG	P05129	697 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FGF1	P05230	155 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	APRT	P07741	180 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MMP2	P08253	660 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CTPS1	P17812	591 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HLA-DPA1	P20036	260 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	VIPR1	P32241	457 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	DRD3	P35462	400 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CD96	P40200	585 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ETV3	P41162	512 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ADPRH	P54922	357 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MRPS15	P82914	257 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	DMWD	Q09019	674 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SGCG	Q13326	291 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GALNT3	Q14435	633 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SSPN	Q14714	243 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PPA1	Q15181	289 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	UGP2	Q16851	508 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	C21orf62-AS1	Q17RA5	79 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	LRRC23	Q53EV4	343 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FAM182A	Q5T1J6	154 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	KIAA0895L	Q68EN5	471 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SLC6A19	Q695T7	634 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TTC27	Q6P3X3	843 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PRR23B	Q6ZRT6	265 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GALNTL5	Q7Z4T8	443 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PRUNE1	Q86TP1	453 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ZBTB46	Q86UZ6	589 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	THNSL2	Q86YJ6	484 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MAML2	Q8IZL2	1156 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ZNF619	Q8N2I2	560 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ANKRD53	Q8N9V6	530 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	DNAAF3	Q8N9W5	541 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	AGBL5	Q8NDL9	886 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	OR2T34	Q8NGX1	318 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	DENND1A	Q8TEH3	1009 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SNX19	Q92543	992 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ECHDC3	Q96DC8	303 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TOE1	Q96GM8	510 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TBL1Y	Q9BQ87	522 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ZPBP	Q9BS86	351 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CARD6	Q9BX69	1037 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GPR174	Q9BXC1	333 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	C1QTNF7	Q9BXJ2	289 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GPR63	Q9BZJ6	419 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TRIM4	Q9C037	500 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	RAB17	Q9H0T7	212 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PCED1A	Q9H1Q7	454 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	KCNH6	Q9H252	994 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	VPS11	Q9H270	941 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	EHD1	Q9H4M9	534 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	WSB2	Q9NYS7	404 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PCYOX1	Q9UHG3	505 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PTBP2	Q9UKA9	531 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	UTP11	Q9Y3A2	253 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PCDHGA2	Q9Y5H1	932 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FADS3	Q9Y5Q0	445 aa		6.13	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MYO18A	Q92614	2054 aa	Known RBP	6.13	□□□□□ -1.43

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