RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 FFAR3O14843 346 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 GPR42O15529 346 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 B4GAT1O43505 415 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 DFNA5O60443 496 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 FOXD2O60548 495 aaPredicted RBP11.62□□□□□ -0.55
CD44-209ENST00000433892 ATE1O95260 518 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 ALBP02768 609 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 S100BP04271 92 aaPredicted RBP11.62□□□□□ -0.55
CD44-209ENST00000433892 GALTP07902 379 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 TCF3P15923 654 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 HMOX2P30519 316 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 OR1D2P34982 312 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 NUP107P57740 925 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 RPL38P63173 70 aaKnown RBP11.62□□□□□ -0.55
CD44-209ENST00000433892 TRAF3Q13114 568 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 NEDD8Q15843 81 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 CHST9Q7L1S5 443 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 ITIH5Q86UX2 942 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 STK40Q8N2I9 435 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 CARNMT1Q8N4J0 409 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 FAM86B1Q8N7N1 296 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 BHMTQ93088 406 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 PLD4Q96BZ4 506 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 C17orf80Q9BSJ5 609 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 APOL5Q9BWW9 433 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 TLR9Q9NR96 1032 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 ELOVL2Q9NXB9 296 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 PKD2L2Q9NZM6 624 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 VAPAQ9P0L0 249 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 LHX3Q9UBR4 397 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 NEUROG3Q9Y4Z2 214 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 DYTNA2CJ06 578 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 C2orf78A6NCI8 922 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 H0Y626 953 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 ARNTLO00327 626 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 TAPBPO15533 448 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 PFDN1O60925 122 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 OTCP00480 354 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 ANXA6P08133 673 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 ELK4P28324 431 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 ARSFP54793 590 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 RHOAP61586 193 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 SREBF2Q12772 1141 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 PWP1Q13610 501 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 TMEM26Q6ZUK4 368 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 STK32CQ86UX6 486 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 SERPINA9Q86WD7 417 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 CLEC4FQ8N1N0 589 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 LKAAEAR1Q8TD35 194 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 C2orf15Q8WU43 125 aaKnown RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 FIG4Q92562 907 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 TMBIM1Q969X1 311 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 PDLIM5Q96HC4 596 aaKnown RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 ZNF583Q96ND8 569 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 TM6SF2Q9BZW4 377 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 NAA50Q9GZZ1 169 aaKnown RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 CLPBQ9H078 707 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 HIPK3Q9H422 1215 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 CWH43Q9H720 699 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 FARSBQ9NSD9 589 aaKnown RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 TMEM45AQ9NWC5 275 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 RNF186Q9NXI6 227 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 GRXCR2A6NFK2 248 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 H3BMQ9 156 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 K7ERQ8 282 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 RAD51BO15315 384 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 NBNO60934 754 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 DEAF1O75398 565 aaPredicted RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 TRIM16O95361 564 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 PRAMEF1O95521 474 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 RAP2AP10114 183 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 COL6A1P12109 1028 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 HMGA1P17096 107 aaKnown RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 GGT1P19440 569 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 JAK1P23458 1154 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 EEF1B2P24534 225 aaKnown RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 HMGCLP35914 325 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 GGT5P36269 586 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 ENTPD1P49961 510 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 HMGCS1Q01581 520 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 CRY1Q16526 586 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 FAM98BQ52LJ0 330 aaKnown RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 SGO1Q5FBB7 561 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 CCNYL2Q5T2Q4 361 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 PDZD8Q8NEN9 1154 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 HSPBAP1Q96EW2 488 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 COG8Q96MW5 612 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 EGFL8Q99944 293 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 THUMPD3Q9BV44 507 aaKnown RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 OSBPL6Q9BZF3 934 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 CARS2Q9HA77 564 aaKnown RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 ZFP14Q9HCL3 533 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 NMRK2Q9NPI5 230 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 IFT80Q9P2H3 777 aaPredicted RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 LRFN2Q9ULH4 789 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 FAF1Q9UNN5 650 aaPredicted RBP11.61□□□□□ -0.55
CD44-209ENST00000433892 CCL27Q9Y4X3 112 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 PCDHB1Q9Y5F3 818 aa11.61□□□□□ -0.55
CD44-209ENST00000433892 PRSS21Q9Y6M0 314 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms