RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 LCN8Q6JVE9 175 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 HMBOX1Q6NT76 420 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 GOLM1Q8NBJ4 401 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 CHST14Q8NCH0 376 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 OR2T34Q8NGX1 318 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 OR2T3Q8NH03 318 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 TCF25Q9BQ70 676 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 CD244Q9BZW8 370 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 ARMC1Q9NVT9 282 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 KCTD5Q9NXV2 234 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 SLCO3A1Q9UIG8 710 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 SLC25A13Q9UJS0 675 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 RAB26Q9ULW5 256 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
HOXC4-202ENST00000430889 A0A1W2PQ67 120 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 TSPAN11A1L157 253 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 AQP12BA6NM10 295 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 A8MX80 341 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 GIPC1O14908 333 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 SPINT3P49223 89 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 POLR2JP52435 117 aaKnown RBP13.71□□□□□ -0.21
HOXC4-202ENST00000430889 SEMG2Q02383 582 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 BNIP2Q12982 314 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 CAPRIN1Q14444 709 aaKnown RBP13.71□□□□□ -0.21
HOXC4-202ENST00000430889 RPS6KA2Q15349 733 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 SMU1Q2TAY7 513 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 PRSS36Q5K4E3 855 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 FOXB2Q5VYV0 432 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 ZDHHC20Q5W0Z9 365 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 TMEM215Q68D42 235 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 DHFR2Q86XF0 187 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 PTRH1Q86Y79 214 aaKnown RBP13.71□□□□□ -0.21
HOXC4-202ENST00000430889 RASGRP3Q8IV61 690 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 AQP12AQ8IXF9 295 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 DPP10Q8N608 796 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 OR2A12Q8NGT7 310 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 METTL6Q8TCB7 284 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 IRF7Q92985 503 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 C1orf50Q9BV19 199 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 NTMT1Q9BV86 223 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 SLC2A11Q9BYW1 496 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 BRD9Q9H8M2 597 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 IPPKQ9H8X2 491 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 MARK1Q9P0L2 795 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 B4GALT6Q9UBX8 382 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 TSR3Q9UJK0 312 aaKnown RBP13.71□□□□□ -0.21
HOXC4-202ENST00000430889 LEF1Q9UJU2 399 aaPredicted RBP13.71□□□□□ -0.21
HOXC4-202ENST00000430889 CNOT6Q9ULM6 557 aaKnown RBP13.71□□□□□ -0.21
HOXC4-202ENST00000430889 NEUROG3Q9Y4Z2 214 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 INSL6Q9Y581 213 aa13.71□□□□□ -0.21
HOXC4-202ENST00000430889 ZFC3H1O60293 1989 aaKnown RBP13.71□□□□□ -0.22
HOXC4-202ENST00000430889 SYNCRIPO60506 623 aaKnown RBP13.7□□□□□ -0.22
HOXC4-202ENST00000430889 RFPL2O75678 378 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 WDR47O94967 919 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 UGT2B4P06133 528 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 RHOP08100 348 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
HOXC4-202ENST00000430889 MSH3P20585 1137 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 AOAHP28039 575 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 HOXA9P31269 272 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 KCNK10P57789 538 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 CDKL1Q00532 357 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 ABRAXAS2Q15018 415 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 KIAA0040Q15053 153 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 PDK3Q15120 406 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 ATP6AP1LQ52LC2 224 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 CYP2R1Q6VVX0 501 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 Q6ZVU0 165 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 KIAA2013Q8IYS2 634 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 FRS2Q8WU20 508 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 LRTOMTQ8WZ04 291 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 VPS33AQ96AX1 596 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 ULK4Q96C45 1275 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 MRGPRX3Q96LB0 322 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 COPS8Q99627 209 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 MUC13Q9H3R2 512 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 ZDHHC6Q9H6R6 413 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 IL1RL2Q9HB29 575 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 SPHK2Q9NRA0 654 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 TDP1Q9NUW8 608 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 SMOXQ9NWM0 555 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
HOXC4-202ENST00000430889 ACTR3BQ9P1U1 418 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 TRPS1Q9UHF7 1281 aa13.7□□□□□ -0.22
HOXC4-202ENST00000430889 MBD1Q9UIS9 605 aaPredicted RBP13.7□□□□□ -0.22
HOXC4-202ENST00000430889 DYTNA2CJ06 578 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 NEDD8-MDP1E9PL57 170 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 K7EPI3 171 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ARNTLO00327 626 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 NPPAP01160 153 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ZCCHC18P0CG32 403 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 TYRP14679 529 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 PTPN2P17706 415 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 EPORP19235 508 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 CCR7P32248 378 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 GGT5P36269 586 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 BMPR1AP36894 532 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
HOXC4-202ENST00000430889 CLCN2P51788 898 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 CREB5Q02930 508 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms