RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RALBP11234 206 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 PTPN4P29074 926 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 CA5AP35218 305 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 MAGEA1P43355 309 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 RPS15P62841 145 aaKnown RBP14.53□□□□□ -0.08
MSH5-208ENST00000429846 SEMA5AQ13591 1074 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 IGFBP7Q16270 282 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 UGT8Q16880 541 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 TMTC4Q5T4D3 741 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 CLEC18BQ6UXF7 455 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 ASB18Q6ZVZ8 466 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 CLEC18CQ8NCF0 446 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 OR4K2Q8NGD2 314 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 HEXDCQ8WVB3 486 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 ULK4Q96C45 1275 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 RNF31Q96EP0 1072 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 CALR3Q96L12 384 aaKnown RBP14.53□□□□□ -0.08
MSH5-208ENST00000429846 LRFN5Q96NI6 719 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 INSM2Q96T92 566 aaPredicted RBP14.53□□□□□ -0.08
MSH5-208ENST00000429846 CCM2Q9BSQ5 444 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 FICDQ9BVA6 458 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 WWP1Q9H0M0 922 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 GOLPH3Q9H4A6 298 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 ASB8Q9H765 288 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 FANCEQ9HB96 536 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 BTRCQ9Y297 605 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 EFR3BQ9Y2G0 817 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 ARL5AQ9Y689 179 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 CFAP20Q9Y6A4 193 aaKnown RBP14.53□□□□□ -0.08
MSH5-208ENST00000429846 COLEC10Q9Y6Z7 277 aa14.53□□□□□ -0.08
MSH5-208ENST00000429846 CFAP99D6REC4 459 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 H7C0C1 242 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 SCRG1O75711 98 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 ZNF189O75820 626 aaPredicted RBP14.52□□□□□ -0.09
MSH5-208ENST00000429846 LCA5LO95447 670 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 CRTAMO95727 393 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 AGTP01019 485 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 RBL1P28749 1068 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 HADHAP40939 763 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 ATP5OP48047 213 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 CD97P48960 835 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 MARCKSL1P49006 195 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 PRLHRP49683 370 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 PRKAA1Q13131 559 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 TBX2Q13207 712 aaPredicted RBP14.52□□□□□ -0.09
MSH5-208ENST00000429846 CCDC181Q5TID7 509 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 RANBP10Q6VN20 620 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 ZNF517Q6ZMY9 492 aaPredicted RBP14.52□□□□□ -0.09
MSH5-208ENST00000429846 DET1Q7L5Y6 550 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 TMEM135Q86UB9 458 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 ATCAYQ86WG3 371 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 TMEM126BQ8IUX1 230 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 CDKL3Q8IVW4 592 aaPredicted RBP14.52□□□□□ -0.09
MSH5-208ENST00000429846 FAM26EQ8N5C1 309 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 HM13Q8TCT9 377 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 MIB2Q96AX9 1013 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 ZNF501Q96CX3 271 aaPredicted RBP14.52□□□□□ -0.09
MSH5-208ENST00000429846 DCUN1D1Q96GG9 259 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 GORASP1Q9BQQ3 440 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 TSPY26PQ9H489 355 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 KCND1Q9NSA2 647 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 FKBPLQ9UIM3 349 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 CRLS1Q9UJA2 301 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 TLK1Q9UKI8 766 aa14.52□□□□□ -0.09
MSH5-208ENST00000429846 C17orf113A0A1B0GUU1 675 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 OR6C74A6NCV1 312 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 STK10O94804 968 aaKnown RBP14.51□□□□□ -0.09
MSH5-208ENST00000429846 NTRK1P04629 796 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 KLK3P07288 261 aaPredicted RBP14.51□□□□□ -0.09
MSH5-208ENST00000429846 NR1D1P20393 614 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 ITGALP20701 1170 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 PTPN7P35236 360 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 ADRA1AP35348 466 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 KPNA2P52292 529 aaKnown RBP14.51□□□□□ -0.09
MSH5-208ENST00000429846 GSDMDP57764 484 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 PRPSAP1Q14558 356 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 GSE1Q14687 1217 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 PTPRCAPQ14761 206 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 IZUMO3Q5VZ72 239 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 DUS1LQ6P1R4 473 aaKnown RBP14.51□□□□□ -0.09
MSH5-208ENST00000429846 DAAM2Q86T65 1068 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 CCDC170Q8IYT3 715 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 ACVR1CQ8NER5 493 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 SPDYE1Q8NFV5 336 aaPredicted RBP14.51□□□□□ -0.09
MSH5-208ENST00000429846 ACTL9Q8TC94 416 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 LRRC45Q96CN5 670 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 RMDN2Q96LZ7 410 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 VPS37BQ9H9H4 285 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 SYTL2Q9HCH5 934 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 C1GALT1Q9NS00 363 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 SOHLH2Q9NX45 425 aa14.51□□□□□ -0.09
MSH5-208ENST00000429846 FEZ2Q9UHY8 353 aaPredicted RBP14.51□□□□□ -0.09
MSH5-208ENST00000429846 PCDHGA9Q9Y5G4 932 aaKnown RBP14.51□□□□□ -0.09
MSH5-208ENST00000429846 MACROD2A1Z1Q3 448 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 PJA2O43164 708 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 MSL3P1P0C860 447 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 CTNNA2P26232 953 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 CTNNA1P35221 906 aaKnown RBP14.5□□□□□ -0.09
MSH5-208ENST00000429846 XIAPP98170 497 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 OTUD4Q01804 1114 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms