RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 SLC36A3Q495N2 470 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 SHEQ5VZ18 495 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 OR10T2Q8NGX3 314 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 SLC7A14Q8TBB6 771 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 C12orf57Q99622 126 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 ADAM2Q99965 735 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 C16orf70Q9BSU1 422 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 BTBD2Q9BX70 525 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 VPS28Q9UK41 221 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 MAN2B2Q9Y2E5 1009 aa14.25□□□□□ -0.13
SYNGAP1-203ENST00000428982 TCRBV5S1A1TA0A578 114 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 MOXD2PA6NHM9 499 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 C2orf81A6NN90 581 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 CHRNA1P02708 482 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 TPMTP51580 245 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 PIGFQ07326 219 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 SCN4BQ8IWT1 228 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 MLPHQ9BV36 600 aaPredicted RBP14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 ARHGAP39Q9C0H5 1083 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 PDZD7Q9H5P4 517 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 SNX15Q9NRS6 342 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 HSD17B12Q53GQ0 312 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 PIAS4Q8N2W9 510 aaPredicted RBP14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 OR6F1Q8NGZ6 308 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 TWNKQ96RR1 684 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 ZNF416Q9BWM5 594 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 R3HDMLQ9H3Y0 253 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 ZNF556Q9HAH1 456 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 ADAM30Q9UKF2 790 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 FAM92AA1XBS5 289 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 EFCAB10A6NFE3 127 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 FAM20BO75063 409 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 SLITRK5O94991 958 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 FADS2O95864 444 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 CYP3A5P20815 502 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 AIF1P55008 147 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 S100A12P80511 92 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 IL18R1Q13478 541 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 DPYSL2Q16555 572 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 MBLAC2Q68D91 279 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 SLC26A9Q7LBE3 791 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 KCNMB4Q86W47 210 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 SCUBE3Q8IX30 993 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 LRRC52Q8N7C0 313 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 MZB1Q8WU39 189 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 ROGDIQ9GZN7 287 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 C14orf119Q9NWQ9 140 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 CXorf49A8MYA2 514 aaPredicted RBP14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 AIREO43918 545 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 SNRPB2P08579 225 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 ZNF865P0CJ78 1059 aaPredicted RBP14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 C7P10643 843 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 ODC1P11926 461 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 ZNF3P17036 446 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 EIF2DP41214 584 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 CHRNB3Q05901 458 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 BRMS1LQ5PSV4 323 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 PNCKQ6P2M8 343 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 P3H2Q8IVL5 708 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 ANKRD52Q8NB46 1076 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 MCOLN3Q8TDD5 553 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 RNF139Q8WU17 664 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 SIGLEC10Q96LC7 697 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 CSPG4P5Q96PW8 444 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 IL22Q9GZX6 179 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 B3GNT2Q9NY97 397 aa14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 RUVBL2Q9Y230 463 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-203ENST00000428982 TRAV20A0A0B4J274 112 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 KCNK2O95069 426 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 STAU1O95793 577 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 MT-ND1P03886 318 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 CLEC2LP0C7M8 214 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 AZGP1P25311 298 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 NCS1P62166 190 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 PURAQ00577 322 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 CDH17Q12864 832 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 FAM83EQ2M2I3 478 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 TIGD7Q6NT04 549 aaPredicted RBP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 EPGNQ6UW88 154 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 GLRX5Q86SX6 157 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 CCDC117Q8IWD4 279 aaPredicted RBP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 TNS4Q8IZW8 715 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 CAMKK1Q8N5S9 505 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 C19orf18Q8NEA5 215 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 PHF10Q8WUB8 498 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 XYLT2Q9H1B5 865 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 KIF17Q9P2E2 1029 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 PRG3Q9Y2Y8 225 aaPredicted RBP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 H7C2Y5 167 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 M0QYT0 321 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 INMTO95050 263 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 IFNA7P01567 189 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 RPS3P23396 243 aaKnown RBP eCLIP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 YWHAHQ04917 246 aaPredicted RBP14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 SCN1BQ07699 218 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 AMHR2Q16671 573 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 GPAT3Q53EU6 434 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 LIPMQ5VYY2 423 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 TMEM198Q66K66 360 aa14.23□□□□□ -0.13
SYNGAP1-203ENST00000428982 FAM131BQ86XD5 332 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms