RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 CARFQ8N187 725 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 TTC30BQ8N4P2 665 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ZADH2Q8N4Q0 377 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 CNTD1Q8N815 330 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 FAM71BQ8TC56 605 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 CCHCR1Q8TD31 782 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 PPP4R1Q8TF05 950 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 NSMCE1Q8WV22 266 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 HSPH1Q92598 858 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ZNF653Q96CK0 615 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 CLIP3Q96DZ5 547 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 TSGA13Q96PP4 275 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 TRAPPC9Q96Q05 1148 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 VPS35Q96QK1 796 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 INSM2Q96T92 566 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 WDR77Q9BQA1 342 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ALG2Q9H553 416 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ACTR5Q9H9F9 607 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 ZFYVE1Q9HBF4 777 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 RBM22Q9NW64 420 aaKnown RBP eCLIP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 P4HTMQ9NXG6 502 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 AMACRQ9UHK6 382 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 SLC24A2Q9UI40 661 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 POMT2Q9UKY4 750 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 SHOC2Q9UQ13 582 aa7.82□□□□□ -1.16
CSTF1-203ENST00000428552 CFAP20Q9Y6A4 193 aaKnown RBP7.82□□□□□ -1.16
CSTF1-203ENST00000428552 NIPBLQ6KC79 2804 aaeCLIP7.81□□□□□ -1.16
CSTF1-203ENST00000428552 A0A1B0GUH1 482 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 A0A1W2PQJ5 194 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 TMEM150CB9EJG8 249 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 HCRTR1O43613 425 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 LDB2O43679 373 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 ALPPP05187 535 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 CTSBP07858 339 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 SNRPB2P08579 225 aaKnown RBP7.81□□□□□ -1.16
CSTF1-203ENST00000428552 CBSLP0DN79 551 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 ST6GAL1P15907 406 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 HOXB4P17483 251 aaPredicted RBP7.81□□□□□ -1.16
CSTF1-203ENST00000428552 DESP17661 470 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 SERPINB6P35237 376 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 CBSP35520 551 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 SOX11P35716 441 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 HADHAP40939 763 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 CD86P42081 329 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 ZNF165P49910 485 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 SLC10A2Q12908 348 aaPredicted RBP7.81□□□□□ -1.16
CSTF1-203ENST00000428552 BECN1Q14457 450 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 PAFAH1B3Q15102 231 aaKnown RBP7.81□□□□□ -1.16
CSTF1-203ENST00000428552 ZNF630Q2M218 657 aaPredicted RBP7.81□□□□□ -1.16
CSTF1-203ENST00000428552 BNC2Q6ZN30 1099 aaPredicted RBP7.81□□□□□ -1.16
CSTF1-203ENST00000428552 OOSP2Q86WS3 158 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 TRAPPC5Q8IUR0 188 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 LRRC49Q8IUZ0 686 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 RASGEF1AQ8N9B8 481 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 CLEC1AQ8NC01 280 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 SPDYE1Q8NFV5 336 aaPredicted RBP7.81□□□□□ -1.16
CSTF1-203ENST00000428552 TADA1Q96BN2 335 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 FER1L6-AS2Q96M78 137 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 NAP1L5Q96NT1 182 aaPredicted RBP7.81□□□□□ -1.16
CSTF1-203ENST00000428552 IP6K3Q96PC2 410 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 UCN2Q96RP3 112 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 DHRS4Q9BTZ2 278 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 PITPNM3Q9BZ71 974 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 SOHLH2Q9NX45 425 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 ZNF711Q9Y462 761 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 TTLL3Q9Y4R7 772 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 SPO11Q9Y5K1 396 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 CCDC88CQ9P219 2028 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 ZGRF1Q86YA3 2104 aa7.81□□□□□ -1.16
CSTF1-203ENST00000428552 C19orf84I3L1E1 186 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 GAPDHSO14556 408 aaPredicted RBP7.8□□□□□ -1.16
CSTF1-203ENST00000428552 PCDH17O14917 1159 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 ZNF749O43361 778 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 DIAPH2O60879 1101 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 KCNJ13O60928 360 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 ALOX12BO75342 701 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 PEX14O75381 377 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 POP7O75817 140 aaKnown RBP7.8□□□□□ -1.16
CSTF1-203ENST00000428552 IPO13O94829 963 aaKnown RBP7.8□□□□□ -1.16
CSTF1-203ENST00000428552 SLC4A1P02730 911 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 POLR2CP19387 275 aaPredicted RBP7.8□□□□□ -1.16
CSTF1-203ENST00000428552 CYP2A7P20853 494 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 CA4P22748 312 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 CCNCP24863 283 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 HTR1EP28566 365 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 HALP42357 657 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 GABRA4P48169 554 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 LMAN1P49257 510 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 KCNK10P57789 538 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 OTUD4Q01804 1114 aaKnown RBP7.8□□□□□ -1.16
CSTF1-203ENST00000428552 ZBTB17Q13105 803 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 CDSNQ15517 529 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 BOLA3Q53S33 107 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 TMTC4Q5T4D3 741 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 ZFYVE27Q5T4F4 411 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 METRNLQ641Q3 311 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 E4F1Q66K89 784 aaPredicted RBP7.8□□□□□ -1.16
CSTF1-203ENST00000428552 MRPL14Q6P1L8 145 aaKnown RBP7.8□□□□□ -1.16
CSTF1-203ENST00000428552 CDHR3Q6ZTQ4 885 aa7.8□□□□□ -1.16
CSTF1-203ENST00000428552 APTXQ7Z2E3 356 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms