RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 GPR150Q8NGU9 434 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 RSC1A1Q92681 617 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 HDAC10Q969S8 669 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 FERD3LQ96RJ6 166 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 BPTFQ12830 3046 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 NBEAQ8NFP9 2946 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 TRBV5-4A0A0C4DH59 114 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 ANKRD34CP0C6C1 535 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 PRSS56P0CW18 603 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 KCNJ1P48048 391 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 FASTKD1Q53R41 847 aaKnown RBP20.19■□□□□ 0.82
HSPG2-205ENST00000427897 TSTD2Q5T7W7 516 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 CYB5D1Q6P9G0 228 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 VASH2Q86V25 355 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 OOSP2Q86WS3 158 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 CACNA2D3Q8IZS8 1091 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 CLDN19Q8N6F1 224 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 SPDYE1Q8NFV5 336 aaPredicted RBP20.19■□□□□ 0.82
HSPG2-205ENST00000427897 ZFPM2Q8WW38 1151 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 SLC39A7Q92504 469 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 RANBP9Q96S59 729 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 CASS4Q9NQ75 786 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 HRASLS2Q9NWW9 162 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 JRKLQ9Y4A0 524 aa20.19■□□□□ 0.82
HSPG2-205ENST00000427897 LAMA5O15230 3695 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 UBA6A0AVT1 1052 aaPredicted RBP20.18■□□□□ 0.82
HSPG2-205ENST00000427897 CCDC162PA2VCL2 907 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 OR51F1A6NGY5 319 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 ERVH48-1M5A8F1 160 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 ATXN7O15265 892 aaPredicted RBP20.18■□□□□ 0.82
HSPG2-205ENST00000427897 AP2A2O94973 939 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 FTH1P02794 183 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 GSTM1P09488 218 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 GRIA1P42261 906 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 SESN2P58004 480 aaPredicted RBP20.18■□□□□ 0.82
HSPG2-205ENST00000427897 GSTM4Q03013 218 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 PRKAA1Q13131 559 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 ITIH4Q14624 930 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 SIX1Q15475 284 aaPredicted RBP20.18■□□□□ 0.82
HSPG2-205ENST00000427897 DBN1Q16643 649 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 DUS1LQ6P1R4 473 aaKnown RBP20.18■□□□□ 0.82
HSPG2-205ENST00000427897 AFTPHQ6ULP2 937 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 RASGRP3Q8IV61 690 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 GLIS1Q8NBF1 620 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 PMEPA1Q969W9 287 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 PBKQ96KB5 322 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 RAB33BQ9H082 229 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 COG4Q9H9E3 785 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 EPHA6Q9UF33 1036 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 SSUH2Q9Y2M2 353 aa20.18■□□□□ 0.82
HSPG2-205ENST00000427897 IGLV3-16A0A075B6K0 115 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.17■□□□□ 0.82
HSPG2-205ENST00000427897 SGTAO43765 313 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 RAD1O60671 282 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 GOT2P00505 430 aaKnown RBP20.17■□□□□ 0.82
HSPG2-205ENST00000427897 OR56A5P0C7T3 313 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 ARSDP51689 593 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 TERF1P54274 439 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 SARNPP82979 210 aaKnown RBP20.17■□□□□ 0.82
HSPG2-205ENST00000427897 SYTL3Q4VX76 610 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 PCID2Q5JVF3 399 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 DNTTIP2Q5QJE6 756 aaKnown RBP20.17■□□□□ 0.82
HSPG2-205ENST00000427897 KIAA1614Q5VZ46 1190 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 DTX1Q86Y01 620 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 PIANPQ8IYJ0 282 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 LILRA3Q8N6C8 439 aaPredicted RBP20.17■□□□□ 0.82
HSPG2-205ENST00000427897 BMPERQ8N8U9 685 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 SIDT2Q8NBJ9 832 aaKnown RBP20.17■□□□□ 0.82
HSPG2-205ENST00000427897 OR4L1Q8NH43 312 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 NKD1Q969G9 470 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 KIAA1143Q96AT1 154 aaPredicted RBP20.17■□□□□ 0.82
HSPG2-205ENST00000427897 OR6C1Q96RD1 312 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 NAP1L3Q99457 506 aaPredicted RBP20.17■□□□□ 0.82
HSPG2-205ENST00000427897 ARHGAP9Q9BRR9 750 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 ZNF768Q9H5H4 540 aaKnown RBP20.17■□□□□ 0.82
HSPG2-205ENST00000427897 APMAPQ9HDC9 416 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 BFARQ9NZS9 450 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 TCAF1Q9Y4C2 921 aa20.17■□□□□ 0.82
HSPG2-205ENST00000427897 OR6C74A6NCV1 312 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 EFSO43281 561 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 KIF1CO43896 1103 aaKnown RBP20.16■□□□□ 0.82
HSPG2-205ENST00000427897 NPY2RP49146 381 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 RPA4Q13156 261 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 BRD3Q15059 726 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 CAPRIN2Q6IMN6 1127 aaKnown RBP20.16■□□□□ 0.82
HSPG2-205ENST00000427897 CERS6Q6ZMG9 384 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 PRSS42Q7Z5A4 293 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 NLGN4XQ8N0W4 816 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 LSM14AQ8ND56 463 aaKnown RBP20.16■□□□□ 0.82
HSPG2-205ENST00000427897 ACVR1CQ8NER5 493 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 NLGN4YQ8NFZ3 816 aaPredicted RBP20.16■□□□□ 0.82
HSPG2-205ENST00000427897 ELMO1Q92556 727 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 UBXN4Q92575 508 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 ELMO2Q96JJ3 720 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 BBC3Q96PG8 261 aaPredicted RBP20.16■□□□□ 0.82
HSPG2-205ENST00000427897 TSSK1BQ9BXA7 367 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 TRIT1Q9H3H1 467 aaKnown RBP20.16■□□□□ 0.82
HSPG2-205ENST00000427897 KIR3DX1Q9H7L2 352 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 EIF2B3Q9NR50 452 aaKnown RBP20.16■□□□□ 0.82
HSPG2-205ENST00000427897 SLC2A6Q9UGQ3 507 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms