RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MFRPQ9BY79 579 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 NKX2-4Q9H2Z4 354 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PLGRKTQ9HBL7 147 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 FBXL12Q9NXK8 326 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SEC14L3Q9UDX4 400 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CYTH4Q9UIA0 394 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 LEF1Q9UJU2 399 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 MRPS7Q9Y2R9 242 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 HES2Q9Y543 173 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 TNS2Q63HR2 1409 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 FAM172BPA6NC97 362 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 A6NJY4 79 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 TP53I11O14683 189 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 AP5Z1O43299 807 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 DUX1O43812 170 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 TULP3O75386 442 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PAGE1O75459 146 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PAPSS2O95340 614 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 TRBC1P01850 177 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CD247P20963 164 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 RARRES1P49788 294 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SQLEQ14534 574 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
HERC4-206ENST00000427635 GCNT6Q5T4J0 391 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ANO7Q6IWH7 933 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PGBD2Q6P3X8 592 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GPR180Q86V85 440 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ATG4AQ8WYN0 398 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 HMGXB4Q9UGU5 601 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CLEC4AQ9UMR7 237 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CYP8B1Q9UNU6 501 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GPR34Q9UPC5 381 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 RAI2Q9Y5P3 530 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ADGRB2O60241 1585 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 G3V2T6 193 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PGRMC2O15173 223 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 AHCYL1O43865 530 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 FARS2O95363 451 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 GSTT2P0CG29 244 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GSTT2BP0CG30 244 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 BGNP21810 368 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 KLK7P49862 253 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CAMK2DQ13557 499 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GRM2Q14416 872 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PLGLAQ15195 96 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GRIK5Q16478 980 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GXYLT1Q4G148 440 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ADNP2Q6IQ32 1131 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SLC25A25Q6KCM7 469 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 B3GNT6Q6ZMB0 384 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ZNF852Q6ZMS4 543 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GCNT7Q6ZNI0 430 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 OR8H3Q8N146 312 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 LRRC52Q8N7C0 313 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ATAD1Q8NBU5 361 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 C11orf65Q8NCR3 313 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PIGXQ8TBF5 258 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 BPIFB1Q8TDL5 484 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 OMA1Q96E52 524 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 B3GALT6Q96L58 329 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ASPNQ9BXN1 380 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 OSGEPQ9NPF4 335 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 MKKSQ9NPJ1 570 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 ACSS2Q9NR19 701 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 AGPAT5Q9NUQ2 364 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ETNK2Q9NVF9 386 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 OGDHLQ9ULD0 1010 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CEP152O94986 1710 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CEP170BQ9Y4F5 1589 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 FAM205CA6NFA0 338 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SLC33A1O00400 549 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 RGS10O43665 173 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 BUD23O43709 281 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 SNAP91O60641 907 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ZNF37AP17032 561 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 ALOX12P18054 663 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ITPKAP23677 461 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 HTR7P34969 479 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 TMED10P49755 219 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 PLK1P53350 603 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 TLE2Q04725 743 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 OVGP1Q12889 678 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CARD16Q5EG05 197 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 LRIF1Q5T3J3 769 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ARL9Q6T311 187 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PTCHD4Q6ZW05 846 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SH3RF2Q8TEC5 729 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 RASSF5Q8WWW0 418 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GATAD2BQ8WXI9 593 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 IRGQQ8WZA9 623 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 FOXJ1Q92949 421 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SLC25A36Q96CQ1 311 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CSPG4P5Q96PW8 444 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GAL3ST1Q99999 423 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SLC25A23Q9BV35 468 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 FBRSL1Q9HCM7 1045 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 GDAP2Q9NXN4 497 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PACSIN3Q9UKS6 424 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 BACE2Q9Y5Z0 518 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 UNC13BO14795 1591 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms