RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 NINJ2Q9NZG7 142 aa23.98■■□□□ 1.43
VEGFA-209ENST00000425836 LRIT1Q9P2V4 623 aa23.98■■□□□ 1.43
VEGFA-209ENST00000425836 SLC5A10A0PJK1 596 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 OR52A4PA6NMU1 304 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 NUDT21O43809 227 aaKnown RBP23.97■■□□□ 1.43
VEGFA-209ENST00000425836 NIPSNAP2O75323 286 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 PIAS1O75925 651 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 C1QAP02745 245 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 FTH1P19P0C7X4 201 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 AOAHP28039 575 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 PDHA2P29803 388 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 SLC19A1P41440 591 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 RPA4Q13156 261 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 BRD3Q15059 726 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 PPM1JQ5JR12 505 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 PERM1Q5SV97 790 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 EIF1ADQ8N9N8 165 aaKnown RBP23.97■■□□□ 1.43
VEGFA-209ENST00000425836 SPDYE1Q8NFV5 336 aaPredicted RBP23.97■■□□□ 1.43
VEGFA-209ENST00000425836 OR52A5Q9H2C5 316 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 PCDHGA1Q9Y5H4 931 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 PSAT1Q9Y617 370 aa23.97■■□□□ 1.43
VEGFA-209ENST00000425836 CXorf49A8MYA2 514 aaPredicted RBP23.96■■□□□ 1.43
VEGFA-209ENST00000425836 PPM1DO15297 605 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 SPAG6O75602 509 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 XRCC1P18887 633 aaPredicted RBP23.96■■□□□ 1.43
VEGFA-209ENST00000425836 HALP42357 657 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 FASLGP48023 281 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 UBE2IP63279 158 aaKnown RBP23.96■■□□□ 1.43
VEGFA-209ENST00000425836 ILKQ13418 452 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 BOP1Q14137 746 aaKnown RBP23.96■■□□□ 1.43
VEGFA-209ENST00000425836 CCDC157Q569K6 752 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 CAPRIN2Q6IMN6 1127 aaKnown RBP23.96■■□□□ 1.43
VEGFA-209ENST00000425836 SLC9B2Q86UD5 537 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 CCDC74AQ96AQ1 378 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 RMDN2Q96LZ7 410 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 CDC42EP4Q9H3Q1 356 aaKnown RBP23.96■■□□□ 1.43
VEGFA-209ENST00000425836 SARS2Q9NP81 518 aaKnown RBP23.96■■□□□ 1.43
VEGFA-209ENST00000425836 CPNE7Q9UBL6 633 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 RABGEF1Q9UJ41 708 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 MED16Q9Y2X0 877 aa23.96■■□□□ 1.43
VEGFA-209ENST00000425836 FAM159BA6NKW6 160 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 GPC4O75487 556 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 RFPL3O75679 317 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 DKK1O94907 266 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 GP1BAP07359 652 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 FAM153BP0C7A2 387 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 SLC35G4P0C7Q5 338 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 CHRM3P20309 590 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 ABCG1P45844 678 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 RPE65Q16518 533 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 FAM153CQ494X1 144 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 SYTL3Q4VX76 610 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.95■■□□□ 1.43
VEGFA-209ENST00000425836 UBAP2Q5T6F2 1119 aaKnown RBP23.95■■□□□ 1.43
VEGFA-209ENST00000425836 SLC26A11Q86WA9 606 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 GSPT2Q8IYD1 628 aaKnown RBP23.95■■□□□ 1.43
VEGFA-209ENST00000425836 FBF1Q8TES7 1133 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 INSM2Q96T92 566 aaPredicted RBP23.95■■□□□ 1.43
VEGFA-209ENST00000425836 AARSD1Q9BTE6 412 aaKnown RBP23.95■■□□□ 1.43
VEGFA-209ENST00000425836 CCDC68Q9H2F9 335 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 GALPQ9UBC7 116 aa23.95■■□□□ 1.43
VEGFA-209ENST00000425836 APOBEC2Q9Y235 224 aaKnown RBP23.95■■□□□ 1.43
VEGFA-209ENST00000425836 RHPN2P1A8MT19 583 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 MYBL2P10244 700 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 TNFRSF8P28908 595 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 CD151P48509 253 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 CSE1LP55060 971 aaKnown RBP23.95■■□□□ 1.42
VEGFA-209ENST00000425836 PLOD1Q02809 727 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-209ENST00000425836 HHEXQ03014 270 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 HSPA14Q0VDF9 509 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 SLMAPQ14BN4 828 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 ZNF438Q7Z4V0 828 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 CDKL2Q92772 493 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 TMEM159Q96B96 161 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 FAM136AQ96C01 138 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 LATS2Q9NRM7 1088 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 NSMCE4AQ9NXX6 385 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 CDYLQ9Y232 598 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 COMMD10Q9Y6G5 202 aa23.95■■□□□ 1.42
VEGFA-209ENST00000425836 PCNX2A6NKB5 2137 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 PRAMEF33A0A0G2JMD5 474 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 APOA4P06727 396 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 PNLIPP16233 465 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 STX2P32856 288 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 BIRC2Q13490 618 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 OTOAQ7RTW8 1153 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 STRA8Q7Z7C7 330 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 AVL9Q8NBF6 648 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 ASZ1Q8WWH4 475 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 UBXN4Q92575 508 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 KCNJ9Q92806 393 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 CXorf40BQ96DE9 158 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 C12orf66Q96MD2 445 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 NDNQ99608 321 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 CCDC3Q9BQI4 270 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.94■■□□□ 1.427e-7■■■□□ 15.9
VEGFA-209ENST00000425836 CFAP20Q9Y6A4 193 aaKnown RBP23.94■■□□□ 1.42
VEGFA-209ENST00000425836 V9GYY5 206 aaPredicted RBP23.94■■□□□ 1.42
VEGFA-209ENST00000425836 DCHS1Q96JQ0 3298 aa23.94■■□□□ 1.42
VEGFA-209ENST00000425836 E5RI56 91 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms