RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 GALNT1Q10472 559 aaPredicted RBP11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 SNX17Q15036 470 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 DUSP7Q16829 419 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF678Q5SXM1 525 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 CTRB2Q6GPI1 263 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 PAMR1Q6UXH9 720 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 ZPBP2Q6X784 338 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 RIMKLAQ8IXN7 391 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 OR6P1Q8NGX9 317 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 PIK3R3Q92569 461 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 THUMPD3Q9BV44 507 aaKnown RBP11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 TMLHEQ9NVH6 421 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 NPAP1Q9NZP6 1156 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF639Q9UID6 485 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 H3BUI4 141 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 AIREO43918 545 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 SEMA3DO95025 777 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 GRIK1P39086 918 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 TGM4P49221 684 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 CDH17Q12864 832 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 GTF2H3Q13889 308 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 KCTD11Q693B1 232 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 GLRX5Q86SX6 157 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 FAM217AQ8IXS0 508 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 PHACTR4Q8IZ21 702 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 APPL2Q8NEU8 664 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 NCLNQ969V3 563 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 CHCHD6Q9BRQ6 235 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 RPAP3Q9H6T3 665 aaPredicted RBP11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 DNMT3LQ9UJW3 386 aa11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 WBP11Q9Y2W2 641 aaKnown RBP11.14□□□□□ -0.63
SEC61A1-202ENST00000424880 PABPN1LA6NDY0 278 aaKnown RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 ASB14A6NK59 587 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 B4GALT4O60513 344 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 BEST1O76090 585 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 NAT2P11245 290 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 POLR2CP19387 275 aaPredicted RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 NUDT1P36639 197 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 CSRP3P50461 194 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 STAT5BP51692 787 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 FXNQ16595 210 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 FSCN1Q16658 493 aaKnown RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 FAM98BQ52LJ0 330 aaKnown RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 BRMS1LQ5PSV4 323 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 ADAMTSL2Q86TH1 951 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 NLRP8Q86W28 1048 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 CLYBLQ8N0X4 340 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 PHF10Q8WUB8 498 aaKnown RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 GTF2H4Q92759 462 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 YIPF6Q96EC8 236 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 OR51E2Q9H255 320 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 C12orf4Q9NQ89 552 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 TAS2R9Q9NYW1 312 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 A0A1W2PP18 115 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 FADS2P1A8MWK0 482 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 HACD1B0YJ81 288 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 HAT1O14929 419 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 AZIN1O14977 448 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 GSTA4O15217 222 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 NUDT6P53370 316 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 EIF2B5Q13144 721 aaKnown RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 LY6KQ17RY6 165 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 SLC10A6Q3KNW5 377 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF648Q5T619 568 aaPredicted RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 AGAP9Q5VTM2 703 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 SYCE2Q6PIF2 218 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 IDO2Q6ZQW0 420 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 EFL1Q7Z2Z2 1120 aaKnown RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 CYP4Z1Q86W10 505 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 SLC2A14Q8TDB8 520 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 TRIM63Q969Q1 353 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 AURKBQ96GD4 344 aaPredicted RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 SIK2Q9H0K1 926 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 IKZF5Q9H5V7 419 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 RERGLQ9H628 205 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 NECTIN3Q9NQS3 549 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 ADGRE2Q9UHX3 823 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 MAFBQ9Y5Q3 323 aaPredicted RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 WDR90Q96KV7 1748 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 WDR81Q562E7 1941 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 DPYSL4O14531 572 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 DSCR3O14972 297 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 FAM20BO75063 409 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 FHP07954 510 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 SLC10A3P09131 477 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 LTA4HP09960 611 aaKnown RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 LBPP18428 481 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 LRRC26Q2I0M4 334 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 TRIM60Q495X7 471 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 GJC2Q5T442 439 aaPredicted RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 ISCA2Q86U28 154 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 ZBTB8OSQ8IWT0 167 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 GIPC2Q8TF65 315 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 DPF3Q92784 378 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 TMEM134Q9H6X4 195 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 ACOT13Q9NPJ3 140 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 SLC52A3Q9NQ40 469 aa11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 SDR39U1Q9NRG7 319 aaPredicted RBP11.13□□□□□ -0.63
SEC61A1-202ENST00000424880 TEKT2Q9UIF3 430 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms