RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CHN2P52757 468 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 DGKQP52824 942 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SUCLG1P53597 346 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 OAZ1P54368 228 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 HUNKP57058 714 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CDK18Q07002 472 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 BNIP1Q12981 228 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SPP2Q13103 211 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 DNAJC3Q13217 504 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 BYSLQ13895 437 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 LARS2Q15031 903 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 KRT31Q15323 416 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 NAB2Q15742 525 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 EPC2Q52LR7 807 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 PDCD4Q53EL6 469 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 FAM47AQ5JRC9 791 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SPOUT1Q5T280 376 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CERCAMQ5T4B2 595 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 ARMC12Q5T9G4 340 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 LIN9Q5TKA1 542 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 PMF1Q6P1K2 205 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 BRAT1Q6PJG6 821 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 WDR88Q6ZMY6 472 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF813Q6ZN06 617 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 PRSS42Q7Z5A4 293 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 BIVMQ86UB2 503 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 AACSQ86V21 672 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 ARID3BQ8IVW6 561 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 LCORLQ8N3X6 602 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SETD9Q8NE22 299 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 BBS1Q8NFJ9 593 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 HUS1BQ8NHY5 278 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 ZFP28Q8NHY6 868 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 OCC1Q8TAD7 63 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 TBC1D15Q8TC07 691 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 GPT2Q8TD30 523 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 ACMSDQ8TDX5 336 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 ATP8B4Q8TF62 1192 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 HDAC7Q8WUI4 952 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 ROBO4Q8WZ75 1007 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 STARD8Q92502 1023 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 KAT2BQ92831 832 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 EFHD2Q96C19 240 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 DTD2Q96FN9 168 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SLC41A2Q96JW4 573 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 RPGRIP1Q96KN7 1286 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 NECTIN4Q96NY8 510 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 LRRC3BQ96PB8 259 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 CDRT15Q96T59 188 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 PCDHB18PQ96TA0 734 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 NEU1Q99519 415 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 TTYH3Q9C0H2 523 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 NSRP1Q9H0G5 558 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 S1PR5Q9H228 398 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 GOLPH3LQ9H4A5 285 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 RANGRFQ9HD47 186 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SLC6A13Q9NSD5 602 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 OR6C3Q9NZP0 311 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 DKK2Q9UBU2 259 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 MTRF1LQ9UGC7 380 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 SLC12A4Q9UP95 1085 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 NUDCQ9Y266 331 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 C15orf41Q9Y2V0 281 aa3.66□□□□□ -1.82
SF3B1-205ENST00000424674 MRPS2Q9Y399 296 aaKnown RBP3.66□□□□□ -1.82
SF3B1-205ENST00000424674 KAT6AQ92794 2004 aa3.65□□□□□ -1.82
SF3B1-205ENST00000424674 NCAPD2Q15021 1401 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 A0A0A6YYC8 382 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 TCRBV7S2A1N4TA0A589 114 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 MAGEB16A2A368 324 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 TARSL2A2RTX5 802 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ZAR1LA6NP61 321 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 I3L1I5 382 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SNAP23O00161 211 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 DNALI1O14645 258 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 B4GALT2O60909 372 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 MOSPD3O75425 235 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 GPC4O75487 556 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ECI2O75521 394 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 TOM1L1O75674 476 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 TOMM70O94826 608 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CXCL10P02778 98 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ALDOAP04075 364 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 HLA-DOAP06340 250 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 SBK2P0C263 348 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 G6PDP11413 515 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 VPREB1P12018 145 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CYP4B1P13584 511 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ARSAP15289 507 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 HPGDP15428 266 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 PFKFB1P16118 471 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 FBLP22087 321 aaKnown RBP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 MMP8P22894 467 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ADRA1DP25100 572 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 YY1P25490 414 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 ITGA3P26006 1051 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 DDX6P26196 483 aaKnown RBP eCLIP3.65□□□□□ -1.83
SF3B1-205ENST00000424674 CHMLP26374 656 aa3.65□□□□□ -1.83
SF3B1-205ENST00000424674 EPHA3P29320 983 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms