RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 FLT3P36888 993 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 LMAN1P49257 510 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 PTPN20Q4JDL3 420 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 KRTCAP3Q53RY4 240 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF648Q5T619 568 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ARMC12Q5T9G4 340 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 AGAP9Q5VTM2 703 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 SHEQ5VZ18 495 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 SCYL2Q6P3W7 929 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 SHISA6Q6ZSJ9 500 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 LRRTM4Q86VH4 590 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 PAQR7Q86WK9 346 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 KBTBD2Q8IY47 623 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 SIRT6Q8N6T7 355 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ACBD4Q8NC06 268 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ZFPM2Q8WW38 1151 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 COX14Q96I36 57 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 GPR137Q96N19 417 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF396Q96N95 335 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-203ENST00000424270 BDH2Q9BUT1 245 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 SGPP1Q9BX95 441 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 KLHL25Q9H0H3 589 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 CLSTN2Q9H4D0 955 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ATXN10Q9UBB4 475 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 TRPS1Q9UHF7 1281 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 NOCTQ9UK39 431 aaKnown RBP6.12□□□□□ -1.43
SDCBP-203ENST00000424270 PSMD13Q9UNM6 376 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 MAP2K7O14733 419 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 TTI1O43156 1089 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 DAPK3O43293 454 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 SOCS5O75159 536 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 CRLF1O75462 422 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 TPOP07202 933 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 UMODP07911 640 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 IGFBP2P18065 325 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 POLR2CP19387 275 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-203ENST00000424270 HLA-DPA1P20036 260 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 HOXC12P31275 282 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 KIR2DL3P43628 341 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 PAPOLAP51003 745 aaKnown RBP6.11□□□□□ -1.43
SDCBP-203ENST00000424270 CLCNKAP51800 687 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 ITKQ08881 620 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 OLIG2Q13516 323 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 GTF2H3Q13889 308 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 NKAIN1Q4KMZ8 207 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF569Q5MCW4 686 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 Q5PR19 223 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 MANEALQ5VSG8 457 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 ABHD17BQ5VST6 288 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 ALS2CLQ60I27 953 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 TMEM211Q6ICI0 200 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 DOLPP1Q86YN1 238 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 TRAPPC5Q8IUR0 188 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 ULK2Q8IYT8 1036 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 GHDCQ8N2G8 530 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 BBS5Q8N3I7 341 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 WDTC1Q8N5D0 677 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 EMC1Q8N766 993 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 LINC00301Q8NCQ3 95 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 OR10Q1Q8NGQ4 319 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 PROKR1Q8TCW9 393 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 BRIX1Q8TDN6 353 aaKnown RBP6.11□□□□□ -1.43
SDCBP-203ENST00000424270 THAP3Q8WTV1 239 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-203ENST00000424270 SLC20A1Q8WUM9 679 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 RND1Q92730 232 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 NT5C3BQ969T7 300 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 SLC35C1Q96A29 364 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 C18orf8Q96DM3 657 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 SCRN2Q96FV2 425 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 COX4I2Q96KJ9 171 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 Q96MF0 132 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 PPM1MQ96MI6 270 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 KREMEN1Q96MU8 473 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 TTC25Q96NG3 672 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 KCTD15Q96SI1 283 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-203ENST00000424270 SPATA16Q9BXB7 569 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 MAGEB5Q9BZ81 275 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 SOX17Q9H6I2 414 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-203ENST00000424270 NOL6Q9H6R4 1146 aaKnown RBP6.11□□□□□ -1.43
SDCBP-203ENST00000424270 MRM3Q9HC36 420 aaKnown RBP6.11□□□□□ -1.43
SDCBP-203ENST00000424270 GDPD2Q9HCC8 539 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 KLHL1Q9NR64 748 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 RASSF1Q9NS23 344 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 SEMA5BQ9P283 1151 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 DHCR7Q9UBM7 475 aaKnown RBP6.11□□□□□ -1.43
SDCBP-203ENST00000424270 AP1M2Q9Y6Q5 423 aa6.11□□□□□ -1.43
SDCBP-203ENST00000424270 NSG1A0A0A6YYJ2 146 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 WASH4PA8MWX3 477 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 FGF10O15520 208 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 VEGFDO43915 354 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 TOXO94900 526 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ATE1O95260 518 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 WDPCPO95876 746 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 SLC4A1P02730 911 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 PIM1P11309 404 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ACPPP15309 386 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 BMP7P18075 431 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 IL4RP24394 825 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 NSG1P42857 185 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 KPNA2P52292 529 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms