RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 IGLV3-25P01717 112 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 GP2P55259 537 aaKnown RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 SETMARQ53H47 684 aaPredicted RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 COL13A1Q5TAT6 717 aaPredicted RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 LRRTM3Q86VH5 581 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 C8orf59Q8N0T1 100 aaPredicted RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 FNDC5Q8NAU1 212 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 OR10Q1Q8NGQ4 319 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 ITFG1Q8TB96 612 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 PNPT1Q8TCS8 783 aaKnown RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 YTHDF1Q9BYJ9 559 aaKnown RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 ARNT2Q9HBZ2 717 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 PALMDQ9NP74 551 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 FAM118AQ9NWS6 357 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 MARCH5Q9NX47 278 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 BAG5Q9UL15 447 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 PDE4DIPQ5VU43 2346 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 NPEPPSL1A6NEC2 478 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 AQP9O43315 295 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 GALTP07902 379 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 UMPSP11172 480 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 GSTM2P28161 218 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 ALDH7A1P49419 539 aaKnown RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 EEFSECP57772 596 aaKnown RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 MAPK11Q15759 364 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 CARTPTQ16568 116 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 C6orf141Q5SZD1 244 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 CDYL2Q8N8U2 506 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 NDNFQ8TB73 568 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 FRS2Q8WU20 508 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 FIG4Q92562 907 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 HPS1Q92902 700 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 CNDP2Q96KP4 475 aaKnown RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 CCDC138Q96M89 665 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 UROC1Q96N76 676 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 ZNF347Q96SE7 839 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 LEF1Q9UJU2 399 aaPredicted RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 FBXO10Q9UK96 956 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 PRUNE2Q8WUY3 3088 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 CLDN25C9JDP6 229 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 ATXN1LP0C7T5 689 aaKnown RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 PRR35P0CG20 571 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 CDH1P12830 882 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 RPL17P18621 184 aaKnown RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 HTR1EP28566 365 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 FMO4P31512 558 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 CA8P35219 290 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 ARL1P40616 181 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 RPS3AP61247 264 aaKnown RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 EMX2Q04743 252 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 EIF4EBP2Q13542 120 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 CBX2Q14781 532 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 CTF1Q16619 201 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 ALFQ53S48 1182 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 TMEM236Q5W0B7 351 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 DLEU7Q6UYE1 221 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 CIR1Q86X95 450 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 SLC7A5P1Q8MH63 180 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 RTL3Q8N8U3 475 aaKnown RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 ISG20Q96AZ6 181 aaKnown RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 NRBF2Q96F24 287 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 SUSD3Q96L08 255 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 ZBED2Q9BTP6 218 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 LRRC3Q9BY71 257 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 NMUR1Q9HB89 426 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 MTRRQ9UBK8 725 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 PDE10AQ9Y233 779 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 MED16Q9Y2X0 877 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 FAM32AQ9Y421 112 aaKnown RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 U3KQV3 271 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 G3V2T6 193 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 SNX2O60749 519 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 OR4F21O95013 312 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 GLP2RO95838 553 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 TGFBR1P36897 503 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 LHX1P48742 406 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 CDKN1CP49918 316 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 KCNAB2Q13303 367 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 SKIV2LQ15477 1246 aaKnown RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 RBBP7Q16576 425 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 AASDHQ4L235 1098 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 SLC39A12Q504Y0 691 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 PIK3R6Q5UE93 754 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 MARC1Q5VT66 337 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 TIGD7Q6NT04 549 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 PRSS55Q6UWB4 352 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 TMEM179BQ7Z7N9 219 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 SLCO6A1Q86UG4 719 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 OR52B6Q8NGF0 335 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 CNIH3Q8TBE1 160 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 HPS4Q9NQG7 708 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 KIAA1522Q9P206 1035 aaPredicted RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 VPS51Q9UID3 782 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 FNDC3AQ9Y2H6 1198 aaKnown RBP14.13□□□□□ -0.15
MSH5-206ENST00000423982 ACTL7AQ9Y615 435 aa14.13□□□□□ -0.15
MSH5-206ENST00000423982 ABHD14A-ACY1A0A1B0GW23 586 aa14.12□□□□□ -0.15
MSH5-206ENST00000423982 HOXA2O43364 376 aa14.12□□□□□ -0.15
MSH5-206ENST00000423982 DEAF1O75398 565 aaPredicted RBP14.12□□□□□ -0.15
MSH5-206ENST00000423982 HOXC13P31276 330 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms