RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 MSRB2Q9Y3D2 182 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 PCDHB1Q9Y5F3 818 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 IGHV1OR21-1A0A087WYE8 117 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 LILRA5A6NI73 299 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 OR52A4PA6NMU1 304 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 GPC4O75487 556 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 MT-CO3P00414 261 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 ESR1P03372 595 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 AOAHP28039 575 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 ACADLP28330 430 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 PDHA2P29803 388 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 CCR7P32248 378 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 HALP42357 657 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 EPHA4P54764 986 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 PLTPP55058 493 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 CLDN6P56747 220 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 PLOD1Q02809 727 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-205ENST00000423941 THOC5Q13769 683 aaKnown RBP18.06■□□□□ 0.48
HDAC6-205ENST00000423941 HSP90AA5PQ58FG0 334 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 CTSL3PQ5NE16 218 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 HP1BP3Q5SSJ5 553 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-205ENST00000423941 ZNF470Q6ECI4 717 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 CYS1Q717R9 158 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 GALNT7Q86SF2 657 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 KCNMB4Q86W47 210 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 DENND6AQ8IWF6 608 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 RBM12BQ8IXT5 1001 aaKnown RBP18.06■□□□□ 0.48
HDAC6-205ENST00000423941 C2CD4AQ8NCU7 369 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-205ENST00000423941 FBXO36Q8NEA4 188 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 SPDYE1Q8NFV5 336 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-205ENST00000423941 LKAAEAR1Q8TD35 194 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 CERS2Q96G23 380 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 RMDN2Q96LZ7 410 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-205ENST00000423941 FAM129AQ9BZQ8 928 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 WWP1Q9H0M0 922 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 ABCG4Q9H172 646 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 PSMD13Q9UNM6 376 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 VPS9D1Q9Y2B5 631 aa18.06■□□□□ 0.48
HDAC6-205ENST00000423941 IQCF5A8MTL0 148 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 PFDN6O15212 129 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 SLCO2B1O94956 709 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 ERVK-10P10266 1014 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 MTHFD1P11586 935 aaKnown RBP18.05■□□□□ 0.48
HDAC6-205ENST00000423941 SLC1A2P43004 574 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 LEPRP48357 1165 aaKnown RBP18.05■□□□□ 0.48
HDAC6-205ENST00000423941 PDX1P52945 283 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 OR1D5P58170 312 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 GPLD1P80108 840 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 CFHR1Q03591 330 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 ZFP36L1Q07352 338 aaKnown RBP18.05■□□□□ 0.48
HDAC6-205ENST00000423941 CTBP1Q13363 440 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 SEPT7Q16181 437 aaKnown RBP18.05■□□□□ 0.48
HDAC6-205ENST00000423941 TEDDM1Q5T9Z0 273 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 TRMT10BQ6PF06 316 aaKnown RBP18.05■□□□□ 0.48
HDAC6-205ENST00000423941 TMEM26Q6ZUK4 368 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 GRAMD1AQ96CP6 724 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 FAM167BQ9BTA0 163 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 PDP2Q9P2J9 529 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 GNPTGQ9UJJ9 305 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 ANGPTL2Q9UKU9 493 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 CLCA2Q9UQC9 943 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 NCOR2Q9Y618 2525 aa18.05■□□□□ 0.48
HDAC6-205ENST00000423941 PRAMEF33A0A0G2JMD5 474 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 ESYT3A0FGR9 886 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 H3BMM5 538 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 ZW10O43264 779 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 VIPP01282 170 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 RPLP0P05388 317 aaKnown RBP18.04■□□□□ 0.48
HDAC6-205ENST00000423941 JUPP14923 745 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 SPINK2P20155 84 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 GABRB3P28472 473 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 ALDH4A1P30038 563 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 GUCY2DQ02846 1103 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 TARDBPQ13148 414 aaKnown RBP eCLIP18.04■□□□□ 0.48
HDAC6-205ENST00000423941 GBX1Q14549 363 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 ISXQ2M1V0 245 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 ZNF549Q6P9A3 640 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 KIAA0408Q6ZU52 694 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 TMPRSS9Q7Z410 1059 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 ANKMY2Q8IV38 441 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 ZBED8Q8IZ13 594 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 Q8N9G6 341 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-205ENST00000423941 ELMO1Q92556 727 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 PANX3Q96QZ0 392 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 GFM1Q96RP9 751 aaKnown RBP18.04■□□□□ 0.48
HDAC6-205ENST00000423941 TMEM121BQ9BXQ6 578 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-205ENST00000423941 EPB41L1Q9H4G0 881 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 STN1Q9H668 368 aaKnown RBP18.04■□□□□ 0.48
HDAC6-205ENST00000423941 FAM114A2Q9NRY5 505 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 CRYL1Q9Y2S2 319 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 MED16Q9Y2X0 877 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 AKAP13Q12802 2813 aa18.04■□□□□ 0.48
HDAC6-205ENST00000423941 D6RAR5 112 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 KPNA5O15131 536 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 HAUS5O94927 633 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 CPNE6O95741 557 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 SLC35G4P0C7Q5 338 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 PKMP14618 531 aaKnown RBP18.03■□□□□ 0.48
HDAC6-205ENST00000423941 FMO4P31512 558 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms