RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CLCNKAP51800 687 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 PGGT1BP53609 377 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 GALNT1Q10472 559 aaPredicted RBP14□□□□□ -0.17
SHMT1P1-201ENST00000419974 NFATC4Q14934 902 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 PPP1R3AQ16821 1122 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 USP39Q53GS9 565 aaKnown RBP14□□□□□ -0.17
SHMT1P1-201ENST00000419974 ACSBG2Q5FVE4 666 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 LIPMQ5VYY2 423 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 C16orf46Q6P387 395 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 TTC23LQ6PF05 361 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 ASCL5Q7RTU5 278 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 IQCHQ86VS3 1027 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 NUDCD3Q8IVD9 361 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 CPNE9Q8IYJ1 553 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 SLC22A15Q8IZD6 547 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 MYO1HQ8N1T3 1032 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 FBXO15Q8NCQ5 510 aaPredicted RBP14□□□□□ -0.17
SHMT1P1-201ENST00000419974 HM13Q8TCT9 377 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 DYDC1Q8WWB3 177 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 ASB11Q8WXH4 323 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 ZNF75CPQ92670 426 aaPredicted RBP14□□□□□ -0.17
SHMT1P1-201ENST00000419974 NELL1Q92832 810 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 BIRC7Q96CA5 298 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 LINGO1Q96FE5 620 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 SPACA7Q96KW9 195 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 LGR4Q9BXB1 951 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 C1QTNF3Q9BXJ4 246 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 SLC12A9Q9BXP2 914 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 C12orf65Q9H3J6 166 aaKnown RBP14□□□□□ -0.17
SHMT1P1-201ENST00000419974 SPATA6Q9NWH7 488 aaPredicted RBP14□□□□□ -0.17
SHMT1P1-201ENST00000419974 FANCMQ8IYD8 2048 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 TRPM6Q9BX84 2022 aa14□□□□□ -0.17
SHMT1P1-201ENST00000419974 FAM186AA6NE01 2351 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 TK2O00142 265 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 SLC31A1O15431 190 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 GRID2O43424 1007 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 IPO13O94829 963 aaKnown RBP13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 MYL2P10916 166 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 MTHFD2P13995 350 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 HTR1BP28222 390 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 ALDH3A1P30838 453 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 KCNC1P48547 511 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 GNGT1P63211 74 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 ARHGAP8P85298 464 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 ATG16L1Q676U5 607 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 SBSNQ6UWP8 590 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 XKR5Q6UX68 686 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 GCNT7Q6ZNI0 430 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 LRRTM4Q86VH4 590 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 WDR5BQ86VZ2 330 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 MGARPQ8TDB4 240 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 DNASE2BQ8WZ79 361 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 CHMP6Q96FZ7 201 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 DUSP15Q9H1R2 295 aaPredicted RBP13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 EPN3Q9H201 632 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 MANSC1Q9H8J5 431 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 EBF2Q9HAK2 575 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 OR1A2Q9Y585 309 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 DGKBQ9Y6T7 804 aa13.99□□□□□ -0.17
SHMT1P1-201ENST00000419974 ATG2BQ96BY7 2078 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 PLXND1Q9Y4D7 1925 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 GMNCA6NCL1 334 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 POM121BA6NF01 834 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 OR2AG2A6NM03 316 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 STX16-NPEPL1H3BU86 382 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 STX16O14662 325 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 DLX3O60479 287 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 SNNO75324 88 aaPredicted RBP13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 POP7O75817 140 aaKnown RBP13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 SERPINE1P05121 402 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 FGF3P11487 239 aaPredicted RBP13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 MAT2AP31153 395 aaKnown RBP13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 GMPRP36959 345 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 LRP8Q14114 963 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 OR4D1Q15615 310 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 PYCR3Q53H96 274 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 METRNLQ641Q3 311 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 DET1Q7L5Y6 550 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 PIWIL4Q7Z3Z4 852 aaKnown RBP13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 AMZ2Q86W34 360 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 TRAPPC5Q8IUR0 188 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 HOMEZQ8IX15 550 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 PDPRQ8NCN5 879 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 ZBTB44Q8NCP5 570 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 OR56A4Q8NGH8 313 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 LRRC8CQ8TDW0 803 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 ELMO1Q92556 727 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 TMEM159Q96B96 161 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 GRAMD1AQ96CP6 724 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 L3HYPDHQ96EM0 354 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 C7orf26Q96N11 449 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 GPR174Q9BXC1 333 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 ALG9Q9H6U8 611 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 COG4Q9H9E3 785 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 ACSL5Q9ULC5 683 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 OARD1Q9Y530 152 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 PCDHGA2Q9Y5H1 932 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 CFAP54Q96N23 3096 aa13.98□□□□□ -0.17
SHMT1P1-201ENST00000419974 TMEM202A6NGA9 273 aa13.97□□□□□ -0.17
SHMT1P1-201ENST00000419974 TMEM114B3SHH9 223 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms