RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CPT1BQ92523 772 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 CXorf40BQ96DE9 158 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 CCM2Q9BSQ5 444 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 SPRY4Q9C004 299 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 COG4Q9H9E3 785 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 MARCH4Q9P2E8 410 aaPredicted RBP20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 EPHA6Q9UF33 1036 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 B4E171 279 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 KIF1CO43896 1103 aaKnown RBP20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 AP2A2O94973 939 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 KRT14P02533 472 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 RALBP11234 206 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 PDHA2P29803 388 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 TSPAN7P41732 249 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 HALP42357 657 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 MAPK10P53779 464 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 SESN2P58004 480 aaPredicted RBP20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 CDK16Q00536 496 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 TGIF1Q15583 401 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 AFTPHQ6ULP2 937 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 LRRC69Q6ZNQ3 347 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 NLRP9Q7RTR0 991 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 CAND1Q86VP6 1230 aaKnown RBP20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 CFAP206Q8IYR0 622 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 AGGF1Q8N302 714 aaeCLIP20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 MAGOHBQ96A72 148 aaKnown RBP20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 KIFC1Q9BW19 673 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 SYBUQ9NX95 663 aa20.14■□□□□ 0.81
PKNOX1-202ENST00000418336 CFAP99D6REC4 459 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 CAPN5O15484 640 aaPredicted RBP20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 MGAT1P26572 445 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 NMBRP28336 390 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 NSG1P42857 185 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 MC2RQ01718 297 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 LAMB3Q13751 1172 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 SNAP47Q5SQN1 464 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 PAPD7Q5XG87 772 aaKnown RBP20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 CCDC137Q6PK04 289 aaKnown RBP20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 ZFAND4Q86XD8 727 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 MPP5Q8N3R9 675 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 OR4L1Q8NH43 312 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 C12orf66Q96MD2 445 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 NRTNQ99748 197 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 DDA1Q9BW61 102 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 IL22Q9GZX6 179 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 KIR3DX1Q9H7L2 352 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 MRM3Q9HC36 420 aaKnown RBP20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 IMP3Q9NV31 184 aaKnown RBP20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 FAM8A1Q9UBU6 413 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 SLC24A2Q9UI40 661 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 B3GALT1Q9Y5Z6 326 aa20.13■□□□□ 0.81
PKNOX1-202ENST00000418336 ATMQ13315 3056 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 BSNQ9UPA5 3926 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 EFCAB7A8K855 629 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 A8MU76 341 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 KLK10O43240 276 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 KIF5CO60282 957 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 PHF2O75151 1096 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 AVILO75366 819 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 POLBP06746 335 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 MAGEA3P43357 314 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 PREPP48147 710 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 NPY2RP49146 381 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 VPS41P49754 854 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 GPS1Q13098 491 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 SRSF6Q13247 344 aaKnown RBP20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 PRSS42Q7Z5A4 293 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 JAMLQ86YT9 394 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 PLXDC1Q8IUK5 500 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 PPHLN1Q8NEY8 458 aaKnown RBP20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 LKAAEAR1Q8TD35 194 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 ZFPM2Q8WW38 1151 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 KLHL6Q8WZ60 621 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 ART4Q93070 314 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 BBC3Q96PG8 261 aaPredicted RBP20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 TAAR9Q96RI9 348 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 TRIM56Q9BRZ2 755 aaKnown RBP20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 TWSG1Q9GZX9 223 aa20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 ZNF768Q9H5H4 540 aaKnown RBP20.12■□□□□ 0.81
PKNOX1-202ENST00000418336 SLC5A10A0PJK1 596 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 TOX3O15405 576 aaPredicted RBP20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 LIPCP11150 499 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 ACADLP28330 430 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 CSTF2P33240 577 aaKnown RBP eCLIP20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 ARCN1P48444 511 aaKnown RBP20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 FNTAP49354 379 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 LDB1Q86U70 411 aaPredicted RBP20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 MFSD3Q96ES6 412 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 TGM7Q96PF1 710 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 P2RY12Q9H244 342 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 CPNE5Q9HCH3 593 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 APMAPQ9HDC9 416 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 KLHL3Q9UH77 587 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 SOX13Q9UN79 622 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 CDYLQ9Y232 598 aa20.11■□□□□ 0.81
PKNOX1-202ENST00000418336 BHMG1C9JSJ3 638 aaPredicted RBP20.1■□□□□ 0.81
PKNOX1-202ENST00000418336 GAS8O95995 478 aa20.1■□□□□ 0.81
PKNOX1-202ENST00000418336 GSTM1P09488 218 aa20.1■□□□□ 0.81
PKNOX1-202ENST00000418336 SLC35G4P0C7Q5 338 aa20.1■□□□□ 0.81
PKNOX1-202ENST00000418336 TPBGLP0DKB5 382 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms