RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 OR5K3A6NET4 321 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 MYO1FO00160 1098 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 MASP2O00187 686 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 MATN3O15232 486 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 VEGFDO43915 354 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 MFSD11O43934 449 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 ZBTB11O95625 1053 aaPredicted RBP13.4□□□□□ -0.26
SSB-204ENST00000417292 HLA-DQB2P05538 268 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 MMP2P08253 660 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 CA4P22748 312 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 PCK1P35558 622 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 PER3P56645 1201 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 DCDC1P59894 354 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 MYBPC3Q14896 1274 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 NCF4Q15080 339 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 RPE65Q16518 533 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 ZXDCQ2QGD7 858 aaPredicted RBP13.4□□□□□ -0.26
SSB-204ENST00000417292 PTCHD3Q3KNS1 767 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 ATP13A4Q4VNC1 1196 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 ZNF789Q5FWF6 425 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 MRGPREQ86SM8 312 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 LRRC49Q8IUZ0 686 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 TLR10Q9BXR5 811 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 ZFYVE1Q9HBF4 777 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 HRASLS2Q9NWW9 162 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 SHOC2Q9UQ13 582 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 CSAG2Q9Y5P2 127 aa13.4□□□□□ -0.26
SSB-204ENST00000417292 KLF7O75840 302 aaPredicted RBP13.39□□□□□ -0.27
SSB-204ENST00000417292 ALPPP05187 535 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 TMEM253P0C7T8 217 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 PIRTP0C851 137 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 OTX2P32243 289 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 HALP42357 657 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 KPNA2P52292 529 aaKnown RBP13.39□□□□□ -0.27
SSB-204ENST00000417292 TAS2R40P59535 323 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 SLC25A11Q02978 314 aaKnown RBP13.39□□□□□ -0.27
SSB-204ENST00000417292 GALNT2Q10471 571 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 MMRN1Q13201 1228 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 GALNT3Q14435 633 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 PLCL1Q15111 1095 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 KRTAP21-3Q3LHN1 58 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 BOLA3Q53S33 107 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 DCAF10Q5QP82 559 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 TMTC4Q5T4D3 741 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 PDPK2PQ6A1A2 396 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 FAM83HQ6ZRV2 1179 aaPredicted RBP13.39□□□□□ -0.27
SSB-204ENST00000417292 RAB43Q86YS6 212 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 TRAPPC5Q8IUR0 188 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 GALNT16Q8N428 558 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 NIPA2Q8N8Q9 360 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 SLC35G2Q8TBE7 412 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 AGPAT4Q9NRZ5 378 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 NFKBIL1Q9UBC1 381 aaPredicted RBP13.39□□□□□ -0.27
SSB-204ENST00000417292 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 TFR2Q9UP52 801 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 BTRCQ9Y297 605 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 SEC16AO15027 2179 aa13.39□□□□□ -0.27
SSB-204ENST00000417292 MED13LQ71F56 2210 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 HEATR9A2RTY3 570 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 PROSCO94903 275 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 SLC4A1P02730 911 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 CD48P09326 243 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 VCLP18206 1134 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 ITGA3P26006 1051 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 CD86P42081 329 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 ARCN1P48444 511 aaKnown RBP13.38□□□□□ -0.27
SSB-204ENST00000417292 TMEM115Q12893 351 aaPredicted RBP13.38□□□□□ -0.27
SSB-204ENST00000417292 MESDQ14696 234 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 FAM182AQ5T1J6 154 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 TMC3Q7Z5M5 1100 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 ZADH2Q8N4Q0 377 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 OR1L3Q8NH93 324 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 MRFAP1L1Q96HT8 127 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 LURAP1Q96LR2 239 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 ACTR5Q9H9F9 607 aaPredicted RBP13.38□□□□□ -0.27
SSB-204ENST00000417292 SOHLH2Q9NX45 425 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 UVRAGQ9P2Y5 699 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 AMACRQ9UHK6 382 aa13.38□□□□□ -0.27
SSB-204ENST00000417292 CFAP20Q9Y6A4 193 aaKnown RBP13.38□□□□□ -0.27
SSB-204ENST00000417292 ZGRF1Q86YA3 2104 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 OR6C74A6NCV1 312 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 SLC9B1P1A6NJY1 282 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 BPIP17213 487 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 DMPKQ09013 629 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 KRT81Q14533 505 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 ZNF385CQ66K41 422 aaPredicted RBP13.37□□□□□ -0.27
SSB-204ENST00000417292 NCBP2-AS2Q69YL0 99 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 TIGD7Q6NT04 549 aaPredicted RBP13.37□□□□□ -0.27
SSB-204ENST00000417292 DUS1LQ6P1R4 473 aaKnown RBP13.37□□□□□ -0.27
SSB-204ENST00000417292 OOSP2Q86WS3 158 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 CLEC1AQ8NC01 280 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 GRHL3Q8TE85 626 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 TM9SF4Q92544 642 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 FATE1Q969F0 183 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 FER1L6-AS2Q96M78 137 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 TRIB3Q96RU7 358 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 ADGRE3Q9BY15 652 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 RUBCNLQ9H714 662 aa13.37□□□□□ -0.27
SSB-204ENST00000417292 IMP3Q9NV31 184 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms