RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 TRIM48Q8IWZ4 208 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 REXO1L1PQ8IX06 675 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 RBM12BQ8IXT5 1001 aaKnown RBP12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 CT55Q8WUE5 264 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 APOBEC4Q8WW27 367 aaKnown RBP12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 CXorf40BQ96DE9 158 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 VAT1Q99536 393 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 APOL2Q9BQE5 337 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 WWP1Q9H0M0 922 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 HACD3Q9P035 362 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 KLHL8Q9P2G9 620 aaPredicted RBP12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 FKBPLQ9UIM3 349 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 NBASA2RRP1 2371 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 USP9XQ93008 2570 aaPredicted RBP12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 HACD1B0YJ81 288 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 H7C0C1 242 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 APOC4-APOC2K7ER74 178 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 ZSCAN12O43309 604 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 RASSF9O75901 435 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 APOC2P02655 101 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 NTRK1P04629 796 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 PRSS56P0CW18 603 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 MTHFD1P11586 935 aaKnown RBP12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 PTPN7P35236 360 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 CASRP41180 1078 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 ATP5OP48047 213 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 OTUD4Q01804 1114 aaKnown RBP12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 XRCC4Q13426 336 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 LDLRAP1Q5SW96 308 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 FNBP1LQ5T0N5 605 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 CCDC70Q6NSX1 233 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 IRGCQ6NXR0 463 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 ZNF517Q6ZMY9 492 aaPredicted RBP12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 DET1Q7L5Y6 550 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 D2HGDHQ8N465 521 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 OR4K2Q8NGD2 314 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 OR13C4Q8NGS5 318 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 C9orf43Q8TAL5 461 aaPredicted RBP12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 ACTL9Q8TC94 416 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 KIAA1143Q96AT1 154 aaPredicted RBP12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 ZNF501Q96CX3 271 aaPredicted RBP12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 ZDHHC12Q96GR4 267 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 LINC00615Q96LM1 132 aaPredicted RBP12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 RMDN2Q96LZ7 410 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 EFHD1Q9BUP0 239 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 TRIM55Q9BYV6 548 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 GBA3Q9H227 469 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 FAM96AQ9H5X1 160 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 LHX9Q9NQ69 397 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 TRHDEQ9UKU6 1024 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 TP53TG5Q9Y2B4 290 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 EFR3BQ9Y2G0 817 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 NAV2Q8IVL1 2488 aa12.13□□□□□ -0.47
NCKIPSD-203ENST00000415281 FER1L5A0AVI2 2057 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 DOPEY2Q9Y3R5 2298 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 OR5K3A6NET4 321 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 CCL22O00626 93 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 MTSS1O43312 755 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 LDB2O43679 373 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 CREG1O75629 220 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 SRP72O76094 671 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 RECKO95980 971 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 CAPN1P07384 714 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 PSMB4P28070 264 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 KPNA2P52292 529 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 EIF3EP60228 445 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 RPS18P62269 152 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 DNASE1L3Q13609 305 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 BCL7AQ4VC05 210 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 ZNF789Q5FWF6 425 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 ANKRD20A2Q5SQ80 823 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 ANKRD20A1Q5TYW2 823 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 PRAMEF17Q5VTA0 474 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 ANKRD20A3Q5VUR7 823 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 ZDHHC20Q5W0Z9 365 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 PPP1R3BQ86XI6 285 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 RASGRP3Q8IV61 690 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 OR2L2Q8NH16 312 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 UBXN4Q92575 508 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 ARNT2Q9HBZ2 717 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 HRASLS2Q9NWW9 162 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 RSPH14Q9UHP6 348 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 SLC24A2Q9UI40 661 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 ANAPC2Q9UJX6 822 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 TLK1Q9UKI8 766 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 PADI1Q9ULC6 663 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 PIKFYVEQ9Y2I7 2098 aa12.12□□□□□ -0.47
NCKIPSD-203ENST00000415281 CCDC88CQ9P219 2028 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 PRRC2CQ9Y520 2896 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 TCRBV7S2A1N4TA0A589 114 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 GOLGA6L9A6NEM1 432 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 STX7O15400 261 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 KATNA1O75449 491 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 DNAJB5O75953 348 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 PRAMEF1O95521 474 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms