RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 AMER3Q8N944 861 aa2.55□□□□□ -2
MCF2-204ENST00000414978 C8orf58Q8NAV2 365 aa2.55□□□□□ -2
MCF2-204ENST00000414978 KDM1BQ8NB78 822 aa2.55□□□□□ -2
MCF2-204ENST00000414978 PTPMT1Q8WUK0 201 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 METTL21AQ8WXB1 218 aa2.55□□□□□ -2
MCF2-204ENST00000414978 PIGKQ92643 395 aa2.55□□□□□ -2
MCF2-204ENST00000414978 SLC41A2Q96JW4 573 aa2.55□□□□□ -2
MCF2-204ENST00000414978 PRMT6Q96LA8 375 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 ADOQ96SZ5 270 aa2.55□□□□□ -2
MCF2-204ENST00000414978 POLR3CQ9BUI4 534 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 DNAI2Q9GZS0 605 aa2.55□□□□□ -2
MCF2-204ENST00000414978 EPB41L5Q9HCM4 733 aa2.55□□□□□ -2
MCF2-204ENST00000414978 DLL3Q9NYJ7 618 aa2.55□□□□□ -2
MCF2-204ENST00000414978 SLC24A2Q9UI40 661 aa2.55□□□□□ -2
MCF2-204ENST00000414978 MTMR6Q9Y217 621 aa2.55□□□□□ -2
MCF2-204ENST00000414978 MAB21L2Q9Y586 359 aa2.55□□□□□ -2
MCF2-204ENST00000414978 AP1M2Q9Y6Q5 423 aa2.55□□□□□ -2
MCF2-204ENST00000414978 GOLGA6L10A0A0M3HER8 536 aa2.55□□□□□ -2
MCF2-204ENST00000414978 LINC00473A8K010 186 aa2.55□□□□□ -2
MCF2-204ENST00000414978 SLC22A2O15244 555 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CRCPO75575 148 aa2.55□□□□□ -2
MCF2-204ENST00000414978 MBPP02686 304 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 FAM58BPP0C7Q3 252 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ZNF853P0CG23 659 aa2.55□□□□□ -2
MCF2-204ENST00000414978 NMBRP28336 390 aa2.55□□□□□ -2
MCF2-204ENST00000414978 STIP1P31948 543 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 CTNNB1P35222 781 aa2.55□□□□□ -2
MCF2-204ENST00000414978 GPD2P43304 727 aa2.55□□□□□ -2
MCF2-204ENST00000414978 NT5C2P49902 561 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CASP9P55211 416 aa2.55□□□□□ -2
MCF2-204ENST00000414978 TPTEP56180 551 aa2.55□□□□□ -2
MCF2-204ENST00000414978 DLX2Q07687 328 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 SPOCK1Q08629 439 aa2.55□□□□□ -2
MCF2-204ENST00000414978 TWISTNBQ3B726 338 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 TAF1BQ53T94 588 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 MFSD14CQ5VZR4 134 aa2.55□□□□□ -2
MCF2-204ENST00000414978 JADE1Q6IE81 842 aa2.55□□□□□ -2
MCF2-204ENST00000414978 GLDNQ6ZMI3 551 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 GBP6Q6ZN66 633 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ADHFE1Q8IWW8 467 aa2.55□□□□□ -2
MCF2-204ENST00000414978 C10orf53Q8N6V4 93 aa2.55□□□□□ -2
MCF2-204ENST00000414978 HORMAD2Q8N7B1 307 aa2.55□□□□□ -2
MCF2-204ENST00000414978 PI4KAP1Q8N8J0 262 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ENDOVQ8N8Q3 282 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 L3MBTL4Q8NA19 623 aa2.55□□□□□ -2
MCF2-204ENST00000414978 MDGA1Q8NFP4 955 aa2.55□□□□□ -2
MCF2-204ENST00000414978 KAT2AQ92830 837 aa2.55□□□□□ -2
MCF2-204ENST00000414978 EDAQ92838 391 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ARHGEF26Q96DR7 871 aa2.55□□□□□ -2
MCF2-204ENST00000414978 C12orf42Q96LP6 360 aa2.55□□□□□ -2
MCF2-204ENST00000414978 HNRNPABQ99729 332 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 OLFM1Q99784 485 aa2.55□□□□□ -2
MCF2-204ENST00000414978 AIFM2Q9BRQ8 373 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ZNF577Q9BSK1 485 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ABHD6Q9BV23 337 aa2.55□□□□□ -2
MCF2-204ENST00000414978 POLDIP3Q9BY77 421 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 RPAP3Q9H6T3 665 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 MKKSQ9NPJ1 570 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 AKIP1Q9NQ31 210 aa2.55□□□□□ -2
MCF2-204ENST00000414978 TUBE1Q9UJT0 475 aa2.55□□□□□ -2
MCF2-204ENST00000414978 FBXW2Q9UKT8 454 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CHTOPQ9Y3Y2 248 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 SCN10AQ9Y5Y9 1956 aa2.55□□□□□ -2
MCF2-204ENST00000414978 OAS3Q9Y6K5 1087 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 ZSCAN5BA6NJL1 495 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ENO4A6NNW6 628 aa2.55□□□□□ -2
MCF2-204ENST00000414978 KBTBD13C9JR72 458 aa2.55□□□□□ -2
MCF2-204ENST00000414978 MSTNO14793 375 aa2.55□□□□□ -2
MCF2-204ENST00000414978 HLA-DOAP06340 250 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ADH4P08319 380 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ACADLP28330 430 aa2.55□□□□□ -2
MCF2-204ENST00000414978 NUDT6P53370 316 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CTSWP56202 376 aa2.55□□□□□ -2
MCF2-204ENST00000414978 KCNJ10P78508 379 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CHIT1Q13231 466 aa2.55□□□□□ -2
MCF2-204ENST00000414978 GRB14Q14449 540 aa2.55□□□□□ -2
MCF2-204ENST00000414978 RPS6KA1Q15418 735 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CNGA3Q16281 694 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ERCC6LQ2NKX8 1250 aa2.55□□□□□ -2
MCF2-204ENST00000414978 PROSER3Q2NL68 480 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CENPQQ7L2Z9 268 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 OTUD6AQ7L8S5 288 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CENPVQ7Z7K6 275 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 TSPAN33Q86UF1 283 aa2.55□□□□□ -2
MCF2-204ENST00000414978 NUDT13Q86X67 352 aa2.55□□□□□ -2
MCF2-204ENST00000414978 WDR49Q8IV35 697 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ZNF595Q8IYB9 648 aa2.55□□□□□ -2
MCF2-204ENST00000414978 TMEM132CQ8N3T6 1108 aa2.55□□□□□ -2
MCF2-204ENST00000414978 TC2NQ8N9U0 490 aa2.55□□□□□ -2
MCF2-204ENST00000414978 OR2T34Q8NGX1 318 aa2.55□□□□□ -2
MCF2-204ENST00000414978 SAP25Q8TEE9 199 aa2.55□□□□□ -2
MCF2-204ENST00000414978 FAM149B1Q96BN6 582 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CTHRC1Q96CG8 243 aa2.55□□□□□ -2
MCF2-204ENST00000414978 RSPRY1Q96DX4 576 aa2.55□□□□□ -2
MCF2-204ENST00000414978 FRMD8Q9BZ67 464 aaPredicted RBP2.55□□□□□ -2
MCF2-204ENST00000414978 KIAA1456Q9P272 454 aa2.55□□□□□ -2
MCF2-204ENST00000414978 LRIT1Q9P2V4 623 aa2.55□□□□□ -2
MCF2-204ENST00000414978 TSPYL4Q9UJ04 414 aa2.55□□□□□ -2
MCF2-204ENST00000414978 DUSP10Q9Y6W6 482 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ELP1O95163 1332 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms