RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 SPIDRQ14159 915 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 NR1D2Q14995 579 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 RPE65Q16518 533 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 LONRF1Q17RB8 773 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 HSP90AA5PQ58FG0 334 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 DNAJC21Q5F1R6 531 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 AARS2Q5JTZ9 985 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 SPANXN3Q5MJ09 141 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 AGAP9Q5VTM2 703 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 LYPLAL1Q5VWZ2 237 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 WASH2PQ6VEQ5 465 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 USP53Q70EK8 1073 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 SLC9B2Q86UD5 537 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 KCNMB4Q86W47 210 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 CILP2Q8IUL8 1156 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 VRK3Q8IV63 474 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 ZBED8Q8IZ13 594 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 PDIK1LQ8N165 341 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 MMGT1Q8N4V1 131 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 BBOF1Q8ND07 529 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 FBXO36Q8NEA4 188 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 FBXO25Q8TCJ0 367 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 HM13Q8TCT9 377 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 HEXDCQ8WVB3 486 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 ELMO1Q92556 727 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 LPGAT1Q92604 370 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 ART4Q93070 314 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 CXorf40BQ96DE9 158 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 C12orf66Q96MD2 445 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 SLC38A3Q99624 504 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 NUDT22Q9BRQ3 303 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 RAB17Q9H0T7 212 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 OR52A5Q9H2C5 316 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 SARS2Q9NP81 518 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 SAYSD1Q9NPB0 183 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 WASH6PQ9NQA3 447 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 IARS2Q9NSE4 1012 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 WHRNQ9P202 907 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 GALPQ9UBC7 116 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 ZC3H7BQ9UGR2 993 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 DMGDHQ9UI17 866 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 TSR3Q9UJK0 312 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 UTP11Q9Y3A2 253 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 DNMT3AQ9Y6K1 912 aaPredicted RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 FAM169AQ9Y6X4 670 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 WDR87Q6ZQQ6 2873 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 KIR2DS5A0A0G2JLQ3 304 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 A0A0G2JNG1 304 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 C17orf113A0A1B0GUU1 675 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 A0A1W2PNU3 283 aaPredicted RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 SLC5A10A0PJK1 596 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 MAGEB16A2A368 324 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CTAGE15A4D2H0 777 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 OR5K4A6NMS3 321 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 C1QTNF9BB2RNN3 333 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 BHMG1C9JSJ3 638 aaPredicted RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 D6RAR5 112 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 KIR2DS3K7RE56 304 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 KCNJ13O60928 360 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 S1PR4O95977 384 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 VIPP01282 170 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 FTH1P02794 183 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 SLC35G4P0C7Q5 338 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 OR56A5P0C7T3 313 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CTAGE8P0CG41 777 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 MTHFD1P11586 935 aaKnown RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 PNLIPP16233 465 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 TYRP1P17643 537 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 XRCC1P18887 633 aaPredicted RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 GABRB3P28472 473 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CD1CP29017 333 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 SSTR1P30872 391 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 HALP42357 657 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CARSP49589 748 aaKnown RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 PPM1FP49593 454 aaPredicted RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 TTPAP49638 278 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 PGGT1BP53609 377 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 PPP1CAP62136 330 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 SHC2P98077 582 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 GUCY2DQ02846 1103 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 HSPA14Q0VDF9 509 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CALCOCO2Q13137 446 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 GPR18Q14330 331 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 KIR2DS5Q14953 304 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 ISXQ2M1V0 245 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 MAP9Q49MG5 647 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 UBAP2Q5T6F2 1119 aaKnown RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 STEAP4Q687X5 459 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 PTRHD1Q6GMV3 140 aaKnown RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CAPRIN2Q6IMN6 1127 aaKnown RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 MRNIPQ6NTE8 343 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 ZNF549Q6P9A3 640 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CNSTQ6PJW8 725 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CCNI2Q6ZMN8 369 aaPredicted RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 ZNF574Q6ZN55 896 aaPredicted RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 TMEM26Q6ZUK4 368 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CTAGE6Q86UF2 777 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CCDC25Q86WR0 208 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms