RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-229	ENST00000411527	PPM1M	Q96MI6	270 aa		13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	LRFN5	Q96NI6	719 aa		13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	TLR10	Q9BXR5	811 aa		13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	LATS2	Q9NRM7	1088 aa		13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	HACD3	Q9P035	362 aa		13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SAE1	Q9UBE0	346 aa	Predicted RBP	13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	FAM8A1	Q9UBU6	413 aa		13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SLC24A2	Q9UI40	661 aa		13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	TCFL5	Q9UL49	500 aa		13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	G3BP2	Q9UN86	482 aa	Known RBP	13.89	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	CACNA1D	Q01668	2161 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SSU72P8	A0A1W2PR75	194 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SLC9B1P1	A6NJY1	282 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527		F5H423	210 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	LCA5L	O95447	670 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	EPO	P01588	193 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	RAB40AL	P0C0E4	278 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	TMEM253	P0C7T8	217 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	TNNT1	P13805	278 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	POLR2C	P19387	275 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	NFKB1	P19838	968 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	MSH3	P20585	1137 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	AKT1	P31749	480 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	MRPL49	Q13405	166 aa	Known RBP	13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	GSE1	Q14687	1217 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SLC18A3	Q16572	532 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	LONRF2	Q1L5Z9	754 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ODF2	Q5BJF6	829 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	RHOT1	Q8IXI2	618 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	DSEL	Q8IZU8	1212 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	FDCSP	Q8NFU4	85 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	PRR7	Q8TB68	274 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ZFPM2	Q8WW38	1151 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	NUDT9	Q9BW91	350 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	NLN	Q9BYT8	704 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	KIR3DX1	Q9H7L2	352 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ACSL5	Q9ULC5	683 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	BTRC	Q9Y297	605 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	PKP3	Q9Y446	797 aa		13.88	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	NOTCH2	Q04721	2471 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	MGAT4D	A6NG13	374 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	GAPDHS	O14556	408 aa	Predicted RBP	13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	DDAH2	O95865	285 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	POLB	P06746	335 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	CDH3	P22223	829 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ARHGAP25	P42331	645 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	NR2C2	P49116	596 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	VAV2	P52735	878 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ITGA1	P56199	1179 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	WASHC5	Q12768	1159 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	PRKAA1	Q13131	559 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	KRT33B	Q14525	404 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	PTPRCAP	Q14761	206 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	PRKD1	Q15139	912 aa	Predicted RBP	13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SLC1A5	Q15758	541 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SLC6A19	Q695T7	634 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	CAVIN1	Q6NZI2	390 aa	Known RBP	13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	BZW1	Q7L1Q6	419 aa	Known RBP	13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	LUZP1	Q86V48	1076 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	HPS6	Q86YV9	775 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	CARF	Q8N187	725 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527		Q8NA96	180 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	OR4E2	Q8NGC2	313 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	OR2L2	Q8NH16	312 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ZNF398	Q8TD17	642 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	NAT14	Q8WUY8	206 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	TFB1M	Q8WVM0	346 aa	Known RBP	13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	MRGPRX2	Q96LB1	330 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SLC29A3	Q9BZD2	475 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	FANCE	Q9HB96	536 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	COLEC10	Q9Y6Z7	277 aa		13.87	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	STX7	O15400	261 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	CAPN1	P07384	714 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SLC35G4	P0C7Q5	338 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	HLA-DPA1	P20036	260 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	VARS	P26640	1264 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	COL8A1	P27658	744 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	HNRNPH3	P31942	346 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	RORA	P35398	523 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ANP32A	P39687	249 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ABR	Q12979	859 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	LRRC38	Q5VT99	294 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	MFSD7	Q6UXD7	560 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	MED25	Q71SY5	747 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	PID1	Q7Z2X4	250 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ZBTB2	Q8N680	514 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	GLIS1	Q8NBF1	620 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	IPMK	Q8NFU5	416 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	OR1L3	Q8NH93	324 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	PNPLA2	Q96AD5	504 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	DEF6	Q9H4E7	631 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	C1GALT1	Q9NS00	363 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	SMOX	Q9NWM0	555 aa		13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	DDX56	Q9NY93	547 aa	Known RBP	13.86	□□□□□ -0.19
HLA-DQB2-229	ENST00000411527	GPR83	Q9NYM4	423 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms