RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 SPRTNQ9H040 489 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MMP27Q9H306 513 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PPP1R3EQ9H7J1 279 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FKRPQ9H9S5 495 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 POLR1BQ9H9Y6 1135 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CLK4Q9HAZ1 481 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MKKSQ9NPJ1 570 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GAGE2DQ9UEU5 116 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 AGO1Q9UL18 857 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PROCRQ9UNN8 238 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 VDAC3Q9Y277 283 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 AMDHD2Q9Y303 409 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 LOXL2Q9Y4K0 774 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RAI2Q9Y5P3 530 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FAM205AQ6ZU69 1335 aa2.59□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF541Q9H0D2 1346 aa2.59□□□□□ -2
RNU6-1140P-201ENST00000410517 VCANP13611 3396 aa2.59□□□□□ -2
RNU6-1140P-201ENST00000410517 HEG1Q9ULI3 1381 aa2.59□□□□□ -2
RNU6-1140P-201ENST00000410517 LTN1O94822 1766 aa2.59□□□□□ -2
RNU6-1140P-201ENST00000410517 TUBGCP6Q96RT7 1819 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 COL1A1P02452 1464 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 BRCA1P38398 1863 aaKnown RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 LY6G6EA0A0G2JKS1 128 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 A0A0U1RQJ8 604 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 TCRBV21S2A2A0A5A6 115 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 A8MV72 311 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ANKRD66B4E2M5 251 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 M0QZ24 198 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 TNFRSF13BO14836 293 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 LDB2O43679 373 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 PRAMEF11O60813 436 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 EGFP01133 1207 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 T-ENOLP0DO92 83 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 MYBL1P10243 752 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 SRCP12931 536 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 AKR1B1P15121 316 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 GABRB1P18505 474 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 NR2F2P24468 414 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 GNL1P36915 607 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 GMPSP49915 693 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF75DP51815 510 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 EFNA5P52803 228 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 CTSCP53634 463 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 PMS2P54278 862 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 MLLT10P55197 1068 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 SIRPAP78324 504 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 SP3Q02447 781 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 CXCL9Q07325 125 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 TNFAIP1Q13829 316 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 NR1D2Q14995 579 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 PLCB4Q15147 1175 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 RASA2Q15283 850 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ALG11Q2TAA5 492 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF284Q2VY69 593 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 LRIT3Q3SXY7 679 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 AMZ1Q400G9 498 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 SLC10A5Q5PT55 438 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 FAM109BQ6ICB4 259 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 TRNP1Q6NT89 227 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 SLC36A4Q6YBV0 504 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF704Q6ZNC4 412 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 QSOX2Q6ZRP7 698 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 SMIM5Q71RC9 77 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 CHST3Q7LGC8 479 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 CCDC186Q7Z3E2 898 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 FJX1Q86VR8 437 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 GPSM1Q86YR5 675 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 APOBEC3FQ8IUX4 373 aaKnown RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 MINDY1Q8N5J2 469 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 EMC1Q8N766 993 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 LSMEM1Q8N8F7 131 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 OR14L1PQ8NHC6 308 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ARRDC2Q8TBH0 407 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 OIT3Q8WWZ8 545 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ATL1Q8WXF7 558 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 TAAR8Q969N4 342 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 PERPQ96FX8 193 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 MARK4Q96L34 752 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF385AQ96PM9 386 aaKnown RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 SLC25A33Q9BSK2 321 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 MOV10L1Q9BXT6 1211 aaKnown RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 TXLNGYQ9BZA5 131 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 GLIS2Q9BZE0 524 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 DENND2DQ9H6A0 471 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 DNAJC18Q9H819 358 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ERVMER34-1Q9H9K5 563 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 PCDH9Q9HC56 1237 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 PLSCR4Q9NRQ2 329 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ANKEF1Q9NU02 776 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ACSS1Q9NUB1 689 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 SELENONQ9NZV5 590 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 FBXL2Q9UKC9 423 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ZHX1Q9UKY1 873 aaPredicted RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ACSL5Q9ULC5 683 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 PCDHGB4Q9UN71 923 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 NUDCQ9Y266 331 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 KNSTRNQ9Y448 316 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 NME7Q9Y5B8 376 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms