RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 GPATCH1Q9BRR8 931 aaKnown RBP13.36□□□□□ -0.27
LIMS1-205ENST00000410093 NTMT1Q9BV86 223 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 BRD9Q9H8M2 597 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 HEBP1Q9NRV9 189 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 FNDC3AQ9Y2H6 1198 aaKnown RBP13.36□□□□□ -0.27
LIMS1-205ENST00000410093 ST14Q9Y5Y6 855 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 PIKFYVEQ9Y2I7 2098 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 ATP6AP2A0A1C7CYW4 349 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 FAM234BA2RU67 622 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 PABPN1LA6NDY0 278 aaKnown RBP13.35□□□□□ -0.27
LIMS1-205ENST00000410093 NEDD8-MDP1E9PL57 170 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 K7EPI3 171 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 SLC28A1O00337 649 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 SCAMP3O14828 347 aaKnown RBP13.35□□□□□ -0.27
LIMS1-205ENST00000410093 MOSPD3O75425 235 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 ATP6AP2O75787 350 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 ANXA5P08758 320 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 LINC00032P0C843 101 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 EBLN1P0CF75 366 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 VIPR1P32241 457 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 GGT5P36269 586 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 CCR2P41597 374 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 FOXA1P55317 472 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 RHDQ02161 417 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 PTSQ03393 145 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 ZNF33BQ06732 778 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 PRSS36Q5K4E3 855 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 DPY19L3Q6ZPD9 716 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 GOLGA7Q7Z5G4 137 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 ICA1LQ8NDH6 482 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 BHLHE22Q8NFJ8 381 aaPredicted RBP13.35□□□□□ -0.27
LIMS1-205ENST00000410093 METTL6Q8TCB7 284 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 MICAL1Q8TDZ2 1067 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 ATP6V1E2Q96A05 226 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 UHRF1Q96T88 793 aaPredicted RBP13.35□□□□□ -0.27
LIMS1-205ENST00000410093 SLC29A3Q9BZD2 475 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 CD244Q9BZW8 370 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
LIMS1-205ENST00000410093 OPTCQ9UBM4 332 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 TRPS1Q9UHF7 1281 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 EIF2B4Q9UI10 523 aaKnown RBP13.35□□□□□ -0.27
LIMS1-205ENST00000410093 SCOCQ9UIL1 159 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 LEF1Q9UJU2 399 aaPredicted RBP13.35□□□□□ -0.27
LIMS1-205ENST00000410093 FBXO10Q9UK96 956 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 ERVW-1Q9UQF0 538 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 ANGPTL3Q9Y5C1 460 aa13.35□□□□□ -0.27
LIMS1-205ENST00000410093 PRSS51A0A1B0GVH4 220 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 KANSL1LA0AUZ9 987 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 LRRC14BA6NHZ5 514 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 NCF1BA6NI72 391 aaPredicted RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 AQP12BA6NM10 295 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 NCF1CA8MVU1 366 aaPredicted RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 E7ENX8 843 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 RGS14O43566 566 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 NUAK1O60285 661 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 EEDO75530 441 aaKnown RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 SLC22A3O75751 556 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 TRIM16O95361 564 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 PAPLNO95428 1278 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 NCF1P14598 390 aaPredicted RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 GJA1P17302 382 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 HMOX2P30519 316 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 AGTR2P50052 363 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 TRIP10Q15642 601 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 TCEAL5Q5H9L2 206 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 ANO7Q6IWH7 933 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 PAOXQ6QHF9 649 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 MILR1Q7Z6M3 343 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 ADIPOR2Q86V24 386 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 AQP12AQ8IXF9 295 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 ADGRG2Q8IZP9 1017 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 CELF5Q8N6W0 485 aaKnown RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 GPR26Q8NDV2 337 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 TTC16Q8NEE8 873 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 SPDL1Q96EA4 605 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 DCUN1D1Q96GG9 259 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 RPL10LQ96L21 214 aaKnown RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 ZDHHC6Q9H6R6 413 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 NOL11Q9H8H0 719 aaKnown RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 C8orf4Q9NR00 106 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 ASIC5Q9NY37 505 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 CCL26Q9Y258 94 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 AP3M1Q9Y2T2 418 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 TRANK1O15050 2925 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 PLXNA2O75051 1894 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 IQCF5A8MTL0 148 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 HIDE1A8MVS5 230 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 TNFRSF10AO00220 468 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 PSMD11O00231 422 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 NR5A2O00482 541 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 PPP6CO00743 305 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 OR4F21O95013 312 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 EPB42P16452 691 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 SLC7A1P30825 629 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 DPP6P42658 865 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 CTSOP43234 321 aaPredicted RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 STK19P49842 368 aaPredicted RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 CCR3P51677 355 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 AP1S2P56377 157 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms