RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 PLTPP55058 493 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 EIF3BP55884 814 aaKnown RBP23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 GSTM4Q03013 218 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 CTBP1Q13363 440 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 HSP90AA5PQ58FG0 334 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 SPANXN3Q5MJ09 141 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 UNC5AQ6ZN44 842 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 KCNMB4Q86W47 210 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 KRT222Q8N1A0 295 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 LPGAT1Q92604 370 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 SH3KBP1Q96B97 665 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 LRRC39Q96DD0 335 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 RMDN2Q96LZ7 410 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 C12orf66Q96MD2 445 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 TCF12Q99081 682 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 IMP3Q9NV31 184 aaKnown RBP23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 CRYL1Q9Y2S2 319 aa23.34■■□□□ 1.33
UBE2E3-202ENST00000410062 IGHV1OR21-1A0A087WYE8 117 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 ESYT3A0FGR9 886 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 E7ESA3 106 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 CSO75390 466 aaKnown RBP23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 TCEA3O75764 348 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 ERVK-10P10266 1014 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 BOP1Q14137 746 aaKnown RBP23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 ZNF789Q5FWF6 425 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 RNF187Q5TA31 235 aaPredicted RBP23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 PTRHD1Q6GMV3 140 aaKnown RBP23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 DUS1LQ6P1R4 473 aaKnown RBP23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 USP53Q70EK8 1073 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 AVL9Q8NBF6 648 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 ART4Q93070 314 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 DEPDC7Q96QD5 511 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 TBC1D10AQ9BXI6 508 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 RDH14Q9HBH5 336 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 SLC40A1Q9NP59 571 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 IARS2Q9NSE4 1012 aaKnown RBP23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 POT1Q9NUX5 634 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 GNPTGQ9UJJ9 305 aa23.33■■□□□ 1.33
UBE2E3-202ENST00000410062 FRYQ5TBA9 3013 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 D6RAR5 112 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 F8W8V4 182 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 PFDN6O15212 129 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 RPS3P23396 243 aaKnown RBP eCLIP23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 CD1CP29017 333 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 FMO4P31512 558 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 SLC1A2P43004 574 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 PPM1FP49593 454 aaPredicted RBP23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 CTSL3PQ5NE16 218 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 CAPRIN2Q6IMN6 1127 aaKnown RBP23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 TMPRSS9Q7Z410 1059 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 LRRC6Q86X45 466 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 FBXO36Q8NEA4 188 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 FBXO25Q8TCJ0 367 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 BIRC8Q96P09 236 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 OR52A5Q9H2C5 316 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 FBXO6Q9NRD1 293 aaPredicted RBP23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 PCDHB1Q9Y5F3 818 aa23.32■■□□□ 1.32
UBE2E3-202ENST00000410062 LIN7AO14910 233 aaPredicted RBP23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 ZW10O43264 779 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 S1PR4O95977 384 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 MTHFD1P11586 935 aaKnown RBP23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 CCR7P32248 378 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 PDX1P52945 283 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 CSE1LP55060 971 aaKnown RBP23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 ISXQ2M1V0 245 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 SYTL3Q4VX76 610 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 ZDHHC24Q6UX98 284 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 TMEM26Q6ZUK4 368 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 ZBED8Q8IZ13 594 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 CACTIN-AS1Q8N1I8 211 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 CALML6Q8TD86 181 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 CARD6Q9BX69 1037 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 TSSK1BQ9BXA7 367 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 FOXP3Q9BZS1 431 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 EPB41L5Q9HCM4 733 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 INTS10Q9NVR2 710 aaKnown RBP23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 MAPK9P45984 424 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 GUCY2DQ02846 1103 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 RPA4Q13156 261 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 GPR18Q14330 331 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 MAP9Q49MG5 647 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 ZNF449Q6P9G9 518 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 B3GNT8Q7Z7M8 397 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 CEP112Q8N8E3 955 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 CERS2Q96G23 380 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 AHCYL2Q96HN2 611 aaKnown RBP23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 NUDT22Q9BRQ3 303 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 FAM167BQ9BTA0 163 aa23.31■■□□□ 1.32
UBE2E3-202ENST00000410062 SLC5A10A0PJK1 596 aa23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 CPNE6O95741 557 aa23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 GPLD1P80108 840 aa23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 MPP1Q00013 466 aa23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 CAV1Q03135 178 aa23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 CAMK2BQ13554 666 aa23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 STEAP4Q687X5 459 aa23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 TRMT10BQ6PF06 316 aaKnown RBP23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 LMNTD2Q8IXW0 634 aa23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 OR10G6Q8NH81 332 aa23.3■■□□□ 1.32
UBE2E3-202ENST00000410062 UCK1Q9HA47 277 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms